Phage RBP Database

Genbank accession

QVW56392.1 [GenBank]

Protein name

tail fiber protein

RBP type

TF

Evidence Phold

Probability 1,00

Protein sequence

MAKKKNGVDDFNLDNLDLDWNDFDEPPRNKDKKRNPILETGRTIKRSALSAIWPEGKRDQVILKGMPDSATDAYKGYQDAKSVAKDVYAHTKDELVKTERVIKNQARQLGPTMKKYLPDAITRRVDKWARSDEIQGGRYDPEQAGLDRMMAEVFNGQGSGGDAPMTAQEQRDAQQQATEDRIRDGVKDMKSDAMLNAVLSIARDTNSTAALTRGVLLNVERKQLELQYRTLFALQDLSKLSQTQFDRNTPALEAIVKNTALPDYAKEDFSEVRWAHVRRQAADWMNPLRYAEGFMDSIRQKATKKISGAFSDGRGILETLMGMGVEDDFGMEDSSSLSPDARKKNGRDKATGWATKFLAKKLLGPLVEKGQAKSKAYLEENPQAMSAIERAKFLARGATDGSIANSAIAGEREGFLANMFRMGNTLGIVDPLKRENVFLDERNVENLNRSAKFDRKFYLTVVESLPALLSEINKSIRRGYGEHADVEYDMTTRGITSRRDLADRVRKGLADDRGRQKTQESINGVVDFIDQKKTLEPKERQQLADYIESRAATGKSMDVDAIIKDQSQLFRYMGGNTARKVVDALKHVAAGTAGENWGLSNELHDRISSVQVHYKRRQEAVDQAATIYGERILRDAGIFNYDKKNNVFGVDKDFTDPYTMFNDTRMGKTRSGRALTREQELQRKLQNGSATADYIRRKFGEEGGVEDTLSAGDPAKGLGGDKGRYGGGITARQMARVLYGETETNLVDLLGGQDRKNASGETDRLIEAIRATNVTTFVQDILKHVKNMDEQGVLLASLEGGGPDGAGTGGGDGDGPTPRGGGPRRRRIVLGESGLLRRWGGILFDTASGGFNLAKRGVMGAKDRLGKFGSWAKSKFSAGDGPGIFSKLKGLATGGISGAFGSAVEFGKGLLGVRDVYDERGKVVLQGKRLEAGEYWQLSEDGNHLHNPKTLDEIKLGMDILDNAGNVILSAADLAAAGKLSYYKGGKLQSLFKAMSHKSGNLIRNAIGAPKRLLDRMAPSVKSVKEWFTTTPDIYVKGETVPRMTAMLMRQGKYLLKATKTPVFKAKDITGPIIDEAGNDIITAEEMQNPDFKLVDKWGREVKSPLQRIIGRVGGLLSRGKNLIMGIPDMLRKGMGKLKHLATNNPIANWFKGKGGGDFFSNNSLFGGLNTTGKKTNHILIRIYKLLNRRMPGEPEDEGWTEEMEKGIGGGKGVKDALKSAQRFGRGVKARMNRRWGRRFRNGRASVSDWFRGKRDGIMGWAGGVRDRFNNFSDSMRESEHDIGTRYEVERRLAGRDDETADFYRSRLHRKGKFSRNKFKDAIHDDIASAGEAGAEALNAAKGKAQSIGSKLLDRMNRMVNLQEINWFNTMRSSLEENGAQEGFIRGMYAKFSRRMKFKEGGEKRDYLQWFRRKRTDHEGATASGGGRSGGKVKGIMDLFKSIPIIGPLVSILGTVASVMGTIAKWGIMKPAKLLGQGAWWLAKGGARMLGGAAMRGLIMPVATAAGAVVTAVGWPVILGVAAVAGLTWAAFKIATTTYTEYLDTLRLAQYGFQDYDKWSSDDGAKARYLEKQLKQYVSFNETGQATCRGLGAREVQELAVGFGVAEDDKSGMLAFQAMMLQRFIPIYLRWLSALYSQERDIQLADVGNANKVSKDEMKSIFNKVQLTKDAPHLRALTDPRNVDRSLWQKFKDAVTFTSPDLLDADDVMDIQEDVLRGINRRMEDKKNRKFNKGAMEARGIEESGVKEAFTALAANDKETRENAPRPNGWEDGTEQIQIQVDNFAVLNQKDVDALESIRFKTYGLKELDPAIVGQLKMLERFVLPNIDIKNATYKGKWTEAMDVIEPQGWKDPHRADKLRLWFTSRFLPTFMFYVCGYHRFVPTGDPLNLKLTGGYLFELGLLVSRAYNMKADVRQSVWEVAINPFGQDPNMDPSSVSKELETLKVLSKEADLAVRNLLNDKKPMGKRAKWADKNTNTSFYQSKDEGESTSFTAEDHKAAKAAGAFGGGTFTGTPTDINQAVDAMGGARNYAAFSTGSVGIKLGDVEPGSYKQLAEKYPINSLNSEARIKQMISDVAKSMGVPPSVALGMAYAESKFNYKAKNPYASAAGLFQFINSTWDSQLGQYGRQFGIPGQLMASAGGQFDPHANTILGVQFIRDNIMKAQKDLGGKAPPPAVAYLYHFLGPGGGRQFMQAWAKNPNAPATAAPPVTQKVLAGNKSVFYTKQGRLRTLDEVIRELNGRMGSVTANEVESDPSKTKQAISGLSPDAPSSSSPAAAAGAAANDPSMSGTAAGGGQNLPADNENRRDGALETKGAMAADSAVASMSSGPAMPGGTASSSSDMSNVADEVAKQAAADGLSPKDVEKVKSGAAQRTGQANATPVSVASDVSPSAGGFSNATVADQQLQVTKDIKQILEDMRKLMQNGAPMGPSGSTSPAPAKASQTYTQPAPSLNVSRKTG

Physico‐chemical properties

protein length:	2460 AA
molecular weight:	269108,69260 Da
isoelectric point:	9,45862
aromaticity:	0,07398
hydropathy:	-0,54858

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
DC_0337	STR	DC_0337	1	2131	Novel HMM	DC_0337	Central	Low	Positional only	32 proteins / 32 hits
IPR008258	ENZ	DC_0010	2073	2166	InterPro cluster	Transglycosylase SLT domain 1	C-terminal	High	Text match	100 proteins / 142 hits
DC_0301	RBD	DC_0301	2247	2460	Novel HMM	DC_0301	C-terminal	Low	Positional only	30 proteins / 30 hits

	Name	Taxonomy ID	Lineage
Phage	Erwinia phage pEa_SNUABM_6 [NCBI]	2835896	No lineage information
Host	Erwinia amylovora [NCBI]	552	cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Genbank protein accession

QVW56392.1 [NCBI]

Genbank nucleotide accession

MW812343.1 [NCBI]

CDS location

range 203984 -> 211366
strand -

CDS

ATGGCAAAAAAGAAAAATGGTGTCGATGATTTTAATCTCGACAACCTTGATCTTGATTGGAATGACTTTGACGAGCCGCCTCGGAACAAAGACAAAAAACGTAACCCAATCTTGGAGACCGGTCGCACGATTAAGCGTTCCGCGCTGTCAGCAATTTGGCCAGAAGGCAAACGCGACCAGGTCATTTTAAAAGGTATGCCCGATTCTGCTACCGATGCGTACAAAGGCTATCAGGACGCCAAATCGGTCGCAAAAGATGTTTACGCTCATACCAAAGACGAGCTGGTCAAGACTGAGCGTGTAATTAAGAACCAAGCCCGTCAACTTGGCCCAACAATGAAGAAATATTTACCCGATGCGATTACGCGTCGTGTAGATAAATGGGCACGCAGTGACGAGATTCAGGGTGGACGTTATGACCCTGAGCAGGCTGGTTTAGACCGCATGATGGCGGAGGTCTTTAACGGTCAGGGTAGTGGCGGCGACGCCCCGATGACCGCGCAAGAGCAACGCGATGCACAACAGCAAGCCACCGAAGATCGTATTCGTGATGGCGTGAAGGACATGAAGTCCGATGCGATGCTCAACGCTGTACTGAGCATTGCCCGTGACACCAACTCTACCGCTGCCTTAACACGCGGTGTGTTGTTGAACGTTGAACGTAAACAGCTTGAGCTGCAATACCGCACACTGTTTGCACTGCAAGATTTATCCAAACTGAGCCAGACCCAGTTTGACCGTAATACCCCGGCACTCGAAGCGATTGTCAAAAACACCGCACTGCCTGACTACGCCAAAGAGGACTTCTCTGAGGTACGTTGGGCACACGTACGCCGTCAAGCGGCAGACTGGATGAACCCCCTGCGTTATGCCGAAGGGTTCATGGATAGCATTCGTCAGAAAGCGACGAAGAAAATCTCCGGTGCCTTCTCGGATGGTCGTGGGATTCTTGAAACGTTAATGGGGATGGGTGTCGAAGATGACTTCGGCATGGAAGACAGCTCATCACTGTCCCCTGACGCTCGTAAGAAAAACGGCAGGGACAAAGCAACAGGTTGGGCAACCAAGTTCCTGGCTAAAAAGCTGCTGGGGCCGTTGGTTGAGAAAGGGCAGGCGAAATCTAAAGCGTATCTGGAAGAGAACCCACAGGCAATGTCCGCGATTGAGCGGGCGAAGTTCCTTGCCCGTGGTGCGACAGATGGTTCGATAGCCAACTCCGCCATCGCTGGAGAGCGCGAAGGATTTCTGGCGAATATGTTCCGCATGGGGAACACGCTGGGCATCGTTGACCCACTCAAACGAGAAAACGTCTTCCTCGACGAACGTAACGTTGAGAACCTAAACCGTTCAGCGAAATTCGACCGCAAGTTCTATCTGACTGTTGTCGAATCCTTACCGGCATTACTGTCCGAAATCAACAAATCGATTCGTCGTGGCTACGGCGAGCACGCTGATGTTGAATACGACATGACCACGCGCGGTATCACCAGTCGTCGTGACTTGGCTGACCGTGTCCGTAAAGGTCTGGCAGATGACAGAGGTCGTCAGAAAACCCAAGAGTCTATCAACGGGGTTGTGGACTTCATTGACCAGAAGAAAACGCTCGAACCAAAAGAGCGCCAACAACTGGCTGATTACATCGAGTCGCGTGCAGCGACCGGTAAGTCCATGGATGTGGATGCCATCATCAAAGACCAGTCTCAGCTGTTCCGCTACATGGGGGGAAACACCGCCCGTAAGGTGGTGGATGCACTGAAACATGTTGCTGCGGGTACAGCGGGTGAAAACTGGGGCCTGTCGAATGAACTGCACGATCGTATCTCTTCGGTGCAGGTGCATTACAAACGTCGTCAGGAAGCGGTAGACCAAGCAGCGACTATCTACGGGGAACGTATCCTGCGTGATGCCGGTATCTTTAACTACGACAAGAAGAACAATGTCTTTGGCGTGGATAAAGACTTCACCGACCCGTACACCATGTTCAATGACACACGGATGGGGAAAACCCGTTCCGGTCGTGCCCTCACCCGTGAACAGGAGTTGCAACGCAAACTCCAGAACGGTTCCGCAACCGCCGATTATATTCGTCGGAAGTTTGGTGAAGAGGGCGGTGTTGAAGACACCTTATCTGCCGGTGATCCGGCGAAAGGGTTGGGTGGTGATAAGGGTCGTTATGGTGGTGGAATCACAGCCCGTCAGATGGCGCGTGTGCTCTACGGAGAGACCGAGACGAACTTAGTCGACCTGTTAGGTGGCCAAGACCGTAAAAACGCGTCAGGAGAGACTGACAGGCTTATAGAGGCTATCCGCGCAACGAACGTAACCACTTTCGTACAAGACATCCTCAAACATGTCAAAAACATGGATGAACAGGGTGTTCTGTTAGCATCACTTGAAGGTGGTGGCCCCGACGGTGCCGGTACAGGCGGTGGTGACGGCGATGGCCCTACCCCACGCGGCGGTGGACCTCGCCGCCGTCGTATCGTGTTGGGTGAATCCGGCCTGTTACGCCGTTGGGGTGGAATTCTGTTCGACACGGCTTCCGGTGGTTTCAATCTGGCCAAACGTGGTGTCATGGGTGCCAAAGACCGTTTAGGTAAGTTCGGCAGTTGGGCGAAAAGCAAGTTCTCCGCGGGCGACGGTCCGGGAATTTTCTCCAAACTCAAAGGGCTGGCGACCGGCGGTATTTCAGGTGCCTTTGGTTCCGCGGTAGAGTTCGGGAAGGGTTTGCTCGGCGTCCGGGATGTTTACGACGAACGTGGCAAGGTGGTGTTGCAAGGCAAGCGTTTAGAAGCTGGTGAATACTGGCAGTTAAGCGAAGACGGCAACCACTTACACAACCCGAAAACGCTGGACGAGATTAAGTTGGGGATGGATATCCTTGACAACGCCGGTAACGTGATTCTCTCTGCGGCGGATTTAGCAGCAGCGGGTAAACTCAGTTACTACAAAGGCGGGAAACTCCAGTCGTTGTTCAAAGCCATGTCCCACAAATCGGGTAATCTCATCCGTAATGCGATTGGTGCACCGAAGCGTCTACTTGATCGCATGGCCCCTAGCGTGAAGTCGGTTAAAGAATGGTTCACCACAACGCCTGACATTTACGTGAAGGGGGAAACGGTTCCACGCATGACTGCCATGCTGATGCGTCAAGGGAAATACCTGCTGAAAGCGACAAAGACCCCGGTATTCAAAGCGAAGGATATCACAGGGCCAATTATCGACGAAGCTGGTAATGACATCATCACGGCGGAAGAGATGCAGAATCCCGACTTCAAACTGGTGGACAAATGGGGACGTGAAGTTAAATCACCACTCCAACGTATCATCGGCCGTGTGGGCGGGCTGCTGTCGCGTGGTAAGAACCTTATCATGGGTATCCCCGATATGCTTCGTAAGGGCATGGGGAAACTGAAACATCTGGCGACGAACAACCCTATCGCCAATTGGTTTAAAGGGAAAGGGGGAGGAGACTTCTTCAGCAACAATTCCCTGTTCGGTGGCTTGAACACCACTGGCAAGAAAACCAACCATATCCTTATCCGTATCTACAAACTCTTGAACCGCCGTATGCCGGGGGAGCCAGAGGATGAAGGTTGGACTGAGGAAATGGAAAAAGGAATTGGGGGCGGTAAGGGTGTGAAAGATGCACTCAAATCCGCACAACGTTTCGGTCGGGGTGTCAAAGCCCGTATGAACCGTCGCTGGGGTCGCCGGTTCCGCAATGGTCGTGCGTCTGTTTCCGATTGGTTCCGGGGCAAACGCGATGGTATCATGGGGTGGGCTGGCGGGGTTCGTGACCGCTTTAATAATTTCAGCGATTCCATGCGTGAATCTGAACACGACATCGGTACCCGGTACGAAGTGGAACGTCGCTTAGCGGGACGTGATGACGAGACGGCTGATTTCTACCGCAGTCGTTTACACCGCAAAGGCAAGTTCAGCCGGAACAAGTTCAAAGATGCGATCCACGACGATATCGCCTCCGCCGGTGAGGCGGGTGCAGAAGCGCTGAATGCGGCCAAAGGCAAAGCCCAGTCTATCGGGTCGAAACTCTTAGACCGCATGAACCGAATGGTGAACCTGCAAGAAATTAACTGGTTCAACACCATGCGCTCGTCGTTAGAAGAGAACGGTGCCCAAGAAGGGTTTATCCGCGGCATGTACGCCAAGTTCTCTCGTCGCATGAAGTTCAAAGAGGGGGGTGAGAAACGCGACTACCTCCAATGGTTCCGTCGTAAGCGCACTGACCATGAAGGGGCTACTGCCTCAGGTGGCGGACGTTCAGGCGGGAAAGTGAAAGGGATTATGGATCTGTTCAAATCCATCCCGATCATCGGGCCGTTGGTCAGCATTCTGGGCACGGTAGCGTCGGTAATGGGCACCATTGCAAAATGGGGTATCATGAAACCAGCGAAACTGTTAGGTCAGGGTGCATGGTGGTTAGCGAAGGGTGGTGCACGTATGTTGGGCGGGGCTGCGATGCGTGGACTCATCATGCCGGTTGCGACAGCAGCAGGCGCGGTGGTGACTGCGGTCGGTTGGCCGGTGATTCTGGGTGTGGCAGCGGTGGCGGGGCTGACATGGGCGGCGTTTAAGATTGCCACCACAACCTACACCGAATACCTCGACACGTTACGTCTGGCGCAGTACGGTTTCCAAGACTACGATAAGTGGTCATCGGATGACGGTGCGAAAGCCCGCTACCTTGAGAAGCAGTTGAAGCAATACGTGAGCTTCAATGAAACGGGACAAGCCACTTGTCGCGGTTTAGGCGCGAGAGAGGTGCAGGAGTTAGCCGTTGGGTTCGGTGTGGCCGAGGACGACAAGTCCGGTATGCTCGCATTCCAAGCGATGATGCTCCAGCGCTTCATTCCGATTTATCTGCGTTGGTTGTCTGCGCTCTACAGTCAGGAGCGTGATATCCAATTAGCGGATGTCGGTAACGCAAACAAAGTCAGCAAAGACGAGATGAAGTCTATCTTCAACAAAGTTCAGCTCACCAAAGATGCCCCACATCTGCGTGCGCTGACTGACCCTCGTAATGTCGACCGGAGTTTGTGGCAGAAGTTCAAGGATGCGGTGACCTTTACCTCACCTGACTTACTCGATGCTGATGACGTCATGGACATTCAGGAAGATGTCCTGCGCGGCATTAACCGCCGTATGGAAGACAAGAAGAACAGGAAGTTCAACAAAGGCGCAATGGAAGCCCGTGGTATTGAAGAGTCTGGTGTGAAGGAAGCCTTTACCGCACTGGCCGCCAACGACAAAGAAACCCGTGAGAACGCCCCACGTCCAAACGGGTGGGAAGATGGTACGGAGCAGATTCAGATTCAGGTCGATAACTTTGCGGTCTTGAATCAGAAAGATGTGGATGCCCTCGAATCGATTCGTTTCAAAACGTACGGTTTGAAAGAGCTTGACCCGGCAATCGTCGGCCAGCTGAAAATGCTGGAACGGTTTGTGTTGCCAAACATCGACATCAAAAATGCGACGTATAAAGGTAAATGGACTGAGGCGATGGATGTCATCGAACCTCAAGGTTGGAAAGACCCACACCGTGCAGACAAACTGCGCCTGTGGTTCACCAGTCGTTTCCTGCCGACCTTCATGTTCTACGTATGTGGCTATCACCGCTTCGTCCCGACGGGCGATCCGCTGAACCTGAAACTGACGGGCGGTTATCTGTTTGAGTTGGGTCTGTTAGTCAGCCGCGCTTACAACATGAAAGCCGATGTCCGTCAGTCTGTCTGGGAAGTGGCCATCAACCCGTTCGGTCAAGACCCTAACATGGACCCTAGTTCGGTTTCGAAAGAACTGGAAACCTTGAAGGTGCTCTCGAAAGAAGCGGACCTTGCGGTGCGTAATTTACTCAACGACAAAAAGCCGATGGGTAAACGCGCGAAATGGGCAGACAAAAACACCAACACCAGCTTCTACCAATCCAAGGATGAAGGTGAGTCAACGTCGTTTACGGCGGAAGACCACAAGGCCGCAAAAGCAGCCGGTGCATTCGGCGGGGGAACCTTCACGGGAACACCGACCGATATTAACCAAGCTGTAGATGCGATGGGGGGTGCGAGAAACTATGCTGCGTTCTCCACAGGGAGTGTCGGGATTAAACTCGGCGATGTGGAACCGGGTAGTTATAAACAGTTGGCAGAGAAATACCCCATCAATTCACTGAACAGTGAAGCGCGCATCAAGCAGATGATTTCTGATGTCGCCAAATCGATGGGTGTGCCACCAAGTGTGGCATTGGGGATGGCGTACGCCGAGTCGAAGTTTAACTACAAGGCGAAAAACCCGTATGCTTCTGCCGCTGGTCTCTTCCAGTTCATCAACTCCACATGGGATTCCCAGTTGGGGCAGTATGGACGACAATTTGGTATACCTGGCCAGTTAATGGCCAGTGCCGGGGGGCAATTCGACCCACACGCTAACACCATTCTGGGCGTTCAGTTCATTCGTGATAACATCATGAAAGCGCAGAAGGACTTGGGTGGGAAGGCACCACCGCCTGCGGTGGCCTACCTTTACCACTTCTTAGGTCCAGGTGGAGGTCGTCAGTTCATGCAAGCATGGGCGAAGAACCCGAATGCACCAGCTACCGCCGCACCGCCTGTAACGCAGAAAGTGTTGGCCGGTAACAAGAGTGTGTTTTATACCAAACAAGGAAGACTTCGCACACTGGATGAGGTCATTCGTGAACTGAATGGCCGTATGGGGTCAGTGACCGCAAACGAGGTGGAGAGTGATCCATCGAAGACAAAACAAGCTATCAGTGGATTGTCTCCTGATGCACCATCTTCATCAAGCCCTGCGGCTGCTGCGGGAGCTGCTGCAAACGATCCATCCATGTCGGGTACCGCAGCGGGAGGTGGTCAAAACCTGCCTGCCGATAACGAGAACCGTCGTGATGGGGCCTTGGAGACGAAAGGGGCAATGGCTGCGGACAGCGCCGTCGCCTCCATGTCAAGCGGGCCTGCTATGCCGGGAGGTACAGCGTCGAGCAGTTCCGATATGTCAAACGTTGCCGACGAGGTAGCGAAGCAAGCTGCCGCCGATGGACTTTCGCCGAAGGATGTGGAGAAAGTGAAATCGGGTGCCGCACAACGGACAGGACAAGCCAATGCGACTCCTGTGTCGGTCGCGTCGGATGTTTCACCATCCGCTGGCGGTTTCTCTAACGCCACGGTTGCGGATCAGCAACTGCAAGTCACGAAAGACATCAAACAGATTCTGGAAGACATGCGGAAACTGATGCAGAACGGGGCACCGATGGGGCCATCTGGCTCAACGAGTCCTGCGCCTGCGAAAGCATCCCAGACATACACTCAACCAGCCCCAAGTCTGAACGTCTCACGTAAGACGGGCTAA

Genome Context

Title	Authors	Date	PMID	Source
Complete genome sequence of Erwinia phage pEa_SNUABM_6	Kim,S.G., Lee,S.B. and Park,S.C.	2021-01-07	—	GenBank

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence

Literature