Protein

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Genbank accession
AVD99038.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
Protein sequence
MAIVVTDVRGAVYTRLGNISCEIKIGEQWFPFTASENDPENHGRQLFTDLISGRYGEIKPYEEPPEALTQSRERKKVEINAWRNAMEAANYTFEHNGRKWDYGKQTQARLEPSVAAAKAGILPEGFFWTDAENNDVLMTAGELMALSEAAEKAMFTKGMEIHVRQRNMKKALEALNSADEILAYKVGQES
Physico‐chemical
properties
protein length:190 AA
molecular weight: 21404,87520 Da
isoelectric point:5,24444
aromaticity:0,08947
hydropathy:-0,56000

Domains

Domains [InterPro]
DC_1606
STR
4–186
DC_1606
IPR025484
STR
71–180
IPR025484
AVD99038.1
1 190
Architecture
STR
STR 4-186 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage GER2
[NCBI] 		2070178 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AVD99038.1 [NCBI]
Genbank nucleotide accession
MG710528.1 [NCBI]
CDS location
range 60491 -> 61063
strand +
CDS
ATGGCGATTGTTGTAACAGACGTCAGGGGGGCGGTATATACTCGATTGGGTAATATTTCCTGTGAGATAAAAATTGGTGAGCAATGGTTTCCTTTTACTGCGTCAGAAAATGATCCGGAAAATCACGGACGACAACTTTTTACTGATTTAATTTCCGGCAGGTATGGAGAGATTAAGCCGTATGAAGAACCGCCGGAAGCTTTAACACAGTCACGTGAACGGAAGAAGGTGGAAATTAATGCCTGGCGTAATGCGATGGAAGCGGCGAACTACACCTTTGAGCACAATGGCAGGAAATGGGACTACGGCAAACAGACACAGGCGCGTCTTGAGCCGTCAGTGGCTGCCGCGAAAGCAGGAATACTGCCGGAGGGCTTTTTCTGGACGGATGCGGAGAATAACGACGTCCTGATGACGGCTGGGGAGCTGATGGCACTCAGTGAGGCGGCGGAGAAGGCGATGTTCACCAAAGGGATGGAAATTCACGTACGGCAGCGGAACATGAAGAAGGCACTGGAAGCGCTGAACAGTGCGGATGAGATTCTGGCGTATAAGGTGGGTCAGGAGTCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9c01a3736604a74b293c74add39f8d32fdfaf70a73885839dfc400e6af5eac85
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9577
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
An outbreak of a rare STEC serotype (O117:H7) among men who have sex with men Baker,K.S., Dallman,T.J., Thomson,N.R. and Jenkins,C. 2018-07-01 — GenBank