Protein

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Genbank accession
YP_006990286.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,88
Protein sequence
MPVVWHCGFNGIINNTMNIGQAGLFINTNDTTSVSHTLSNDNLINNIFGRGNGTQNGGLLPLINYYGRKWSSRAGYGSSYVFGRVKPSFFDNSVPCLSSELSQPANQSDWFGGWQFRIDLCWPSAERLTTSWRMGFRIGRATHPTYQNPYQVFVCPAAINEANAQNLYAISVVAGQNEKYMEVEWIADTKTLNIYQDDELVSSRTNYTANDMSFGIILMCEHYVGGNTSSTPFFGFELRDMYIQKIVSDADQRLGSSTKVYAFNPVTDDVVQFSRPDGYSSNAAVAVTPIANGGVTPIPSVTAAILGADVVGQQDLYNIDISKVSSRLASVEAVNVRTMARNPLLGSRRVAAIAKSGATQTESENTSTLEQGGLWRFNTLQMVSDPADGSRWNLTKLAGLKVGTKFVA
Physico‐chemical
properties
protein length:408 AA
molecular weight: 44614,48640 Da
isoelectric point:6,11931
aromaticity:0,10294
hydropathy:-0,19877

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_006990286.1
1 408
Domain Start End Length (AA) Confidence
N-terminal 1 32 32 0,0048
Central domain 33 245 214 0,2257
C-terminal 246 408 162 0,9204
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-32
Central
33-245
C-terminal
246-408

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage SPN19
[NCBI] 		2923009 Uroviricota > Caudoviricetes > Casjensviridae > Chivirus SPN19 >
Host Salmonella sp.
[NCBI] 		599 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_006990286.1 [NCBI]
Genbank nucleotide accession
NC_019417 [NCBI]
CDS location
range 21474 -> 22700
strand -
CDS
ATGCCTGTAGTTTGGCACTGCGGTTTTAATGGCATCATCAATAACACGATGAACATCGGTCAAGCGGGCCTGTTTATCAACACCAATGATACGACTTCGGTCAGCCATACGTTGTCCAATGATAACTTGATTAACAACATTTTCGGCAGGGGCAACGGCACGCAAAACGGCGGCTTACTCCCGTTGATCAACTATTACGGTCGCAAATGGTCATCGCGCGCTGGATATGGGTCATCCTATGTCTTCGGGCGCGTTAAGCCGTCATTCTTTGATAATTCCGTGCCGTGTCTTAGCTCTGAACTATCGCAACCCGCAAACCAATCGGACTGGTTTGGTGGGTGGCAGTTCCGTATTGATTTGTGCTGGCCGTCGGCGGAACGCCTGACGACGTCATGGCGTATGGGCTTTCGTATTGGTCGCGCAACACACCCGACGTATCAGAATCCTTATCAGGTCTTTGTCTGTCCGGCCGCGATTAATGAAGCGAACGCGCAAAACCTGTATGCGATTTCGGTGGTAGCAGGACAGAACGAAAAATACATGGAGGTGGAATGGATCGCCGACACCAAAACCCTCAACATCTATCAGGATGACGAGTTAGTTTCGTCCCGTACAAACTACACGGCTAACGACATGTCGTTCGGCATTATTTTGATGTGCGAACATTATGTTGGTGGTAACACTAGCTCTACCCCGTTCTTCGGTTTTGAACTGCGGGACATGTACATCCAGAAAATCGTTTCAGATGCAGATCAGCGCCTCGGGTCTTCGACGAAAGTATACGCGTTTAACCCTGTCACCGATGACGTCGTCCAGTTCTCGCGGCCAGACGGATATTCTTCAAACGCCGCCGTCGCAGTGACGCCAATCGCTAACGGAGGCGTTACCCCTATTCCGTCAGTTACGGCGGCCATCTTGGGGGCGGACGTGGTCGGACAGCAAGACCTGTATAACATCGACATTTCCAAAGTCAGTTCCCGCCTTGCCTCGGTTGAAGCGGTCAACGTCCGGACGATGGCCCGAAATCCGTTGCTGGGGAGTAGACGAGTCGCCGCGATCGCGAAGTCTGGGGCCACTCAAACCGAAAGCGAGAACACCTCGACGCTTGAACAAGGCGGCCTGTGGCGTTTCAATACGTTGCAAATGGTGTCCGACCCTGCGGACGGCTCGCGCTGGAACCTTACAAAACTGGCCGGGCTTAAAGTCGGTACCAAATTCGTCGCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
73aca7aa9068f2d1d2774a92c0c0a5a50416eb6af2060237af0cf4cd441f3be6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5967
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequence of Salmonella Bacteriophage SPN19 Shin,H., Lee,J.-H. and Ryu,S. 2011-12-15 — GenBank