Protein

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Genbank accession
YP_009012162.1 [GenBank]
Protein name
minor capsid protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MALKTKPRWDKYDGYVGNYRGVLGEDIDLDTEANRVLAVGTNSNGAIVVGAGQTGIKGLMIVAVGADIHGAMLDGGINNHAGDPQDVGKHGEITNFQPTVFGRTFGVAISATEGNVKLAVNGVDTGNIAYDTSAANLKSGIVAVDDGFTADDFTVTGTAPNFTIVTTRTDVTITASGEGVTVTEATSVAAAGTNYYGHADGTVNAVKGSDGVYVGHTQEADRLIVNVKDEED
Physico‐chemical
properties
protein length:232 AA
molecular weight: 23824,90380 Da
isoelectric point:4,50690
aromaticity:0,06034
hydropathy:-0,10086

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009012162.1
1 232
Domain Start End Length (AA) Confidence
N-terminal 1 119 119 0,0026
Central domain 120 221 103 0,2117
C-terminal 222 232 10 0,6287
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-119
Central
120-221
C-terminal
222-232

Taxonomy

  Name Taxonomy ID Lineage
Phage Mycobacterium phage Patience
[NCBI] 		1074308 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Mycobacterium smegmatis str. MC2 155
[NCBI] 		246196 Bacteria > Actinobacteria > Actinobacteria > Corynebacteriales > Mycobacteriaceae > Mycobacterium

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009012162.1 [NCBI]
Genbank nucleotide accession
NC_023691 [NCBI]
CDS location
range 13312 -> 14010
strand +
CDS
ATGGCGCTTAAGACCAAGCCGCGCTGGGACAAGTACGACGGCTACGTTGGCAACTACCGGGGCGTCCTCGGTGAGGACATCGACCTGGACACCGAAGCGAACCGAGTTTTGGCAGTCGGCACAAATTCGAACGGCGCTATTGTTGTTGGTGCCGGTCAAACCGGAATCAAGGGTTTGATGATTGTTGCTGTCGGCGCTGACATTCACGGTGCGATGCTTGACGGTGGAATCAACAACCATGCGGGTGATCCGCAGGATGTCGGAAAGCACGGCGAAATCACGAATTTCCAACCGACGGTTTTCGGACGAACCTTCGGAGTTGCGATTTCCGCAACCGAAGGAAACGTGAAGTTGGCCGTGAATGGTGTTGACACCGGAAACATCGCCTACGACACATCCGCTGCAAATCTGAAGTCGGGCATTGTTGCAGTCGATGACGGTTTTACTGCGGATGATTTTACGGTGACCGGTACGGCTCCGAATTTCACTATCGTTACGACTCGAACTGACGTTACGATCACTGCTTCCGGTGAAGGTGTGACCGTTACCGAAGCAACTTCGGTTGCTGCGGCTGGCACGAATTACTACGGCCACGCGGACGGAACTGTAAATGCCGTCAAGGGTTCTGACGGTGTTTATGTCGGTCACACCCAAGAGGCTGATCGACTCATCGTGAACGTCAAGGACGAAGAAGACTAG

Genome Context

Genome Context

Tertiary structure

1 / 2
PDB ID
Source
Method
Resolution
Oligomeric State