Protein

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Genbank accession
QGT52416.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MTIFKAYCWNPNTGRDFTIKKPNWNIVQRCSLKSIETIQFLPQHIYLLDGTTGSETSKRWQRKKCPDDWNRPFSYGSVITKPQGENKISGIAFCTDYERKQYPSLYPNFVTPNLTKGQKYGLSGTLYNPGINVLEVRLKLLYGTKNELVGTYRVQPNQYLDVKEIYTLPSTETVEKFGIAFEVAQTSDFVQFEVYLPKIEQGGEITPFVEDRDEFNGYRKTNTDDGTPPFTGTYEGTPPQSTDYKVYTWIGSKTDKELFYLEERGICKQEAVWCYSRPLNQRVLIGIDSDTYDTEAGRTLKFHVLNGNKGIFDLTGSVIYPEQFTDKRQTFDSDTKAWADNQEPLYVTDANTAIDCTFGEIASNIIEGYYYQQADKRYRVDELLRSAMVNTGYNMGSFWSDWNFDSYANEMRASYNIENCRISEKTNYSSMNEWTGSVSFPTGVVLAPYKPKLNETDTEKLKGVSSATSIWATGVLRTERSTEDWFREYENSRTRPVPTQILFANYNTKKAWLFQQQTNGTWSKSGEFTIPGSATAFARAWGIIPKNGELKGNVIMTDKSYVDFPANVRPITLGVEELFPVIKYNKVKFNPQMYATAYNTKLFWWGQKANVSSLTYGECGVRSVDFMTGLCTIERVYK
Physico‐chemical
properties
protein length:638 AA
molecular weight: 73127,25180 Da
isoelectric point:6,36963
aromaticity:0,13793
hydropathy:-0,58245

Domains

Domains [InterPro]
DC_0670
STR
1–638
DC_0670
QGT52416.1
1 638
Architecture
STR
STR 1-638
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Lactococcus phage 5205F
[NCBI] 		2675236 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Lactococcus lactis
[NCBI] 		1358 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QGT52416.1 [NCBI]
Genbank nucleotide accession
MN689504.1 [NCBI]
CDS location
range 17195 -> 19111
strand +
CDS
ATGACTATTTTTAAAGCGTATTGCTGGAATCCTAACACAGGTAGAGATTTCACAATTAAAAAACCTAATTGGAACATTGTACAACGTTGTTCTTTGAAGAGTATCGAAACAATTCAATTTTTGCCACAACACATCTATTTGTTAGACGGAACGACAGGTTCAGAAACAAGCAAGCGTTGGCAAAGAAAAAAATGTCCTGACGACTGGAATAGACCTTTTAGCTATGGTTCTGTCATCACTAAACCACAAGGAGAGAATAAAATAAGTGGTATTGCTTTTTGTACAGATTATGAAAGAAAACAGTATCCTAGTTTATATCCTAACTTTGTAACACCTAACCTAACAAAAGGGCAAAAATACGGCTTGTCAGGCACTTTATACAATCCAGGTATAAATGTACTAGAGGTACGGTTAAAATTGCTATACGGTACCAAAAATGAGCTTGTAGGTACATACCGAGTTCAACCTAATCAATACTTAGATGTAAAAGAAATTTACACGCTACCTAGTACGGAAACGGTTGAAAAGTTTGGTATAGCTTTTGAAGTGGCACAAACAAGCGATTTTGTACAATTTGAAGTGTATTTGCCTAAAATTGAACAAGGTGGAGAGATCACTCCGTTTGTTGAGGATAGAGATGAATTTAATGGCTATCGAAAAACCAACACAGACGACGGAACGCCGCCATTTACAGGGACTTATGAGGGTACACCACCACAAAGTACCGATTATAAAGTTTATACTTGGATAGGTTCTAAAACTGATAAAGAGCTTTTTTACTTAGAAGAAAGAGGAATTTGCAAACAAGAAGCCGTTTGGTGCTATAGTCGCCCCCTTAATCAACGTGTATTGATTGGAATTGATTCAGACACTTATGACACCGAAGCAGGCAGAACGCTCAAATTTCATGTTTTGAACGGAAATAAGGGCATATTTGATTTGACTGGTAGCGTCATTTATCCTGAACAGTTCACAGATAAACGTCAAACTTTTGACAGCGATACAAAGGCATGGGCAGATAACCAAGAACCGTTATACGTTACTGACGCAAATACTGCAATTGATTGTACTTTCGGAGAAATAGCAAGTAACATCATAGAGGGGTATTATTACCAACAAGCTGATAAACGTTACAGAGTAGATGAACTACTTCGTTCAGCAATGGTTAATACAGGCTATAACATGGGTTCTTTTTGGTCTGATTGGAACTTTGATAGCTACGCGAATGAAATGCGTGCAAGTTATAACATTGAGAATTGTAGGATTAGTGAAAAAACAAATTATAGTTCTATGAATGAATGGACTGGAAGCGTGTCTTTTCCTACTGGTGTTGTTTTAGCACCTTATAAACCAAAACTAAATGAAACGGACACTGAAAAACTCAAAGGGGTTTCTAGTGCAACAAGTATTTGGGCTACTGGTGTATTAAGAACAGAGCGAAGTACAGAAGATTGGTTTAGAGAATACGAAAATTCAAGAACTAGACCAGTACCAACGCAAATTCTTTTTGCTAACTATAACACTAAAAAAGCATGGTTATTTCAACAACAAACCAACGGAACGTGGAGCAAAAGTGGAGAATTCACGATACCAGGAAGCGCCACGGCATTCGCTAGAGCTTGGGGTATTATACCAAAAAATGGAGAATTGAAAGGTAATGTTATCATGACAGATAAGAGTTACGTTGATTTTCCTGCAAACGTTAGACCGATAACGCTAGGAGTGGAAGAACTGTTCCCAGTTATCAAGTATAACAAAGTTAAGTTTAACCCTCAAATGTACGCAACTGCTTACAATACCAAGCTATTTTGGTGGGGACAAAAGGCGAACGTAAGCAGCTTAACTTATGGGGAGTGTGGGGTTCGTTCGGTTGATTTTATGACTGGTTTATGTACAATAGAAAGGGTTTATAAATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
6f8204d9d1e3865dab50e77b21d5c737bb57b13c2d6bc7786529b2226fc9f8d2
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,5438
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome Sequences of 31 Lactococcus lactis Bacteriophages Isolated from Foods Marcelli,B., de Jong,A. and Kuipers,O.P. — — GenBank