Protein

View in Explore
Genbank accession
WKW84416.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,91
Protein sequence
MDEQLFGHDGRGNFLGVSLVEVPEDKTLLFEELLTKADPLDTSKLTDSTEFGRSLLASTDQDNGRLKLGITSEMFTPVPGPKGDQGPQGPQGIQGLKGDPGSQGPKGDPGAEGIDGAAGPQGIQGPKGDPGERGPTGEQGIQGPKGDKGDRGEIGPAGLTWKGEYDPATAYVIDDVVAYQGASYFSIAPSTGIAPTDLTKWAVMSAAGSQGPKGDPGIQGLKGDPGERGPTGPKGDQGEIGLRGPEGLRGLKGDTGDQGIQGPQGIQGPQGLKGDPGERGIDGSQGPQGIQGPIGPKGDTGSIDINALTEAEKRQLYNMLHAYAPQRFWTNEGIITNVGTTAEIPIADSNVTFVFTKRTATDYLGISFKVTDASKPNSFAIRKIGFYDAGGIEGQTWDDYAMPDSPVMIDPVAYMRSRELQTWSIYNRITKNWYKLYLSFDGPVGTAGSSPCHIKVSIEKITAEAPFVL
Physico‐chemical
properties
protein length:469 AA
molecular weight: 49191,09540 Da
isoelectric point:4,71232
aromaticity:0,07036
hydropathy:-0,54499

Domains

Domains [InterPro]
DC_0876
STR
24–247
DC_0876 G3DSA:1.20.5.320
IPR008160
STR
79–131
IPR008160 IPR008160 DC_0588
IPR050149
Unmapped
79–302
IPR050149
DC_2298
STR
230–341
DC_2298
WKW84416.1
1 469
Architecture
STR
RBD
STR 24-341 | RBD 342-468 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage GomatiRiver_11
[NCBI] 		3003697 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Aeromonas sp.
[NCBI] 		647 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WKW84416.1 [NCBI]
Genbank nucleotide accession
OP967013.2 [NCBI]
CDS location
range 155251 -> 156660
strand +
CDS
ATGGATGAACAATTATTTGGCCATGATGGTCGCGGTAACTTTCTTGGTGTTTCACTGGTCGAGGTTCCAGAAGATAAAACTTTATTGTTTGAAGAGCTTTTGACGAAAGCAGACCCACTCGATACATCAAAATTAACGGATTCAACTGAATTTGGGCGTTCATTACTCGCTTCAACCGATCAAGATAATGGTCGTTTGAAATTGGGAATCACGTCCGAAATGTTCACACCTGTACCTGGCCCCAAAGGAGACCAAGGTCCACAAGGCCCGCAGGGAATCCAGGGTCTGAAAGGTGATCCCGGAAGTCAAGGACCTAAAGGTGATCCTGGTGCCGAAGGTATTGATGGAGCAGCCGGTCCTCAAGGTATCCAAGGACCAAAAGGTGATCCAGGTGAACGAGGTCCAACCGGTGAACAAGGTATCCAAGGCCCAAAAGGTGACAAAGGAGACCGCGGTGAAATTGGACCAGCAGGGTTAACATGGAAAGGTGAATATGATCCAGCAACAGCTTATGTAATTGATGATGTTGTTGCATATCAAGGCGCATCATATTTCTCTATTGCACCATCAACTGGTATTGCACCGACTGATCTGACAAAATGGGCTGTTATGTCTGCTGCTGGTTCGCAAGGACCAAAAGGTGATCCTGGAATTCAGGGTCTGAAAGGTGACCCTGGTGAACGAGGTCCAACCGGTCCGAAAGGCGATCAGGGTGAAATTGGTCTTCGTGGTCCGGAAGGTTTACGTGGACTGAAAGGTGATACTGGTGACCAAGGCATTCAAGGGCCACAAGGAATTCAAGGACCGCAAGGTCTGAAAGGTGATCCAGGTGAGCGAGGCATAGATGGAAGTCAAGGGCCACAAGGAATTCAAGGTCCAATTGGACCTAAAGGTGATACCGGGTCAATTGATATAAATGCCCTAACTGAAGCCGAAAAGCGACAGCTTTATAATATGCTTCACGCATATGCCCCACAACGGTTTTGGACAAACGAAGGTATAATTACTAACGTTGGAACTACTGCCGAAATTCCAATTGCTGACAGTAATGTGACTTTTGTTTTTACTAAACGTACAGCAACAGATTATTTGGGCATTAGTTTTAAAGTAACTGATGCATCAAAACCAAATAGTTTTGCAATTCGTAAAATTGGTTTTTATGATGCTGGTGGTATAGAAGGTCAAACATGGGATGATTATGCCATGCCGGATAGTCCTGTTATGATTGACCCGGTCGCATACATGCGGTCGCGTGAACTTCAAACGTGGTCTATTTATAACAGAATAACCAAAAACTGGTATAAATTGTATCTTTCTTTTGATGGACCGGTTGGGACTGCGGGTAGCTCACCTTGTCATATAAAAGTATCAATTGAAAAAATAACAGCAGAGGCACCGTTCGTATTATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
834e3799f8f39df03a1d6efae84f752a4af052ac07ad894fdae79000c885b43c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6201
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Aeromonas phage GomatiRiver_11 Sahoo,L., Parhi,J., Kalappa,G.S., Debnath,C. and Tripathy,P.S. 2023 — GenBank