Protein

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Genbank accession
QGZ17856.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MLQKLNFKPGFNKQDTESGAEGQWTDGDFVRFRYGLPEKIGGWNQLTAASKTLPGAARRQHAFTSFAGEKYTAIGTSQGLFLYYGNDFFDITPLDTAITGCTITTVNGSNTVTINKGSHGLAKGRYVTLSAVTVTAASDYTPAELQQVYEILTTPDVDKFTIQASRAEGGSGMTAAGAATVNPYVEVGPTFQTAGYGWGTYLWGDSTWGTERTISNVILDPGNWSLDNFGEVLVATIFNGKTFTWNAGASGPRGIRASQSTTNFNTTNNPTATRISIVSDRDRHLFHLGTETTIGDPTTQDPMFVRFSNQEDLNTYAPTATNTAGTFRLDTGNQIRAAIQGKDYIFVATDLSAYVIQFVGPPFTFSVRQVGTNCGCIGQHAMSYANGAVWWMSAEGGFFVYDGTVKTLPSLVEDFVFSTDGDNLGINLNSRDVVYSSPNSLYTEINWFYPKDGSDQIDRCVTYNYKENVWTTSSLARTTYTDQGVFNAPYATEYTKTATPVFPDILGITNLYGASIYYAHETGTDQVNSSGTTSIDAFIRSGDWDITSRTSGLGVQTGVADYRGDGEYFMSVKRFIPDFKYQTGNAQVTLFVSSYPDDVAVSSPLGPFTITTSTDKVDTRARGRLVSVQIANTAVGESWRYGTLRLDAQPDGRR
Physico‐chemical
properties
protein length:654 AA
molecular weight: 71207,76720 Da
isoelectric point:4,95672
aromaticity:0,12232
hydropathy:-0,30673

Domains

Domains [InterPro]
DC_0191
STR
1–654
DC_0191
IPR023366
STR
101–180
IPR023366
QGZ17856.1
1 654
Architecture
STR
STR 1-654
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QGZ17856.1
1 654
Domain Start End Length (AA) Confidence
N-terminal 1 92 92 0,8463
Central domain 93 291 200 0,2603
C-terminal 292 654 362 0,3023
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-92
Central
93-291
C-terminal
292-654

Taxonomy

  Name Taxonomy ID Lineage
Phage Pelagibacter phage HTVC027P
[NCBI] 		2686457 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Candidadtus Pelagibacter sp. HTCC1062
[NCBI] 		198252 Pseudomonadota > Alphaproteobacteria > Candidatus Pelagibacterales > Candidatus Pelagibacteraceae > Candidatus Pelagibacter >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QGZ17856.1 [NCBI]
Genbank nucleotide accession
MN698241 [NCBI]
CDS location
range 43798 -> 45762
strand +
CDS
ATGCTACAAAAATTAAATTTCAAGCCTGGCTTTAACAAACAAGATACAGAATCTGGTGCTGAAGGGCAATGGACAGATGGTGATTTTGTTAGATTTAGGTATGGATTACCTGAAAAAATAGGTGGTTGGAATCAACTTACAGCTGCATCGAAGACATTACCAGGAGCTGCTAGAAGACAACATGCTTTTACTTCTTTTGCTGGTGAAAAATATACAGCTATAGGAACATCACAAGGTTTGTTTTTATATTATGGTAATGATTTTTTTGATATTACACCATTAGATACAGCTATTACAGGATGCACTATAACAACTGTTAATGGTTCAAATACTGTAACTATAAATAAAGGATCTCATGGTTTGGCTAAAGGAAGATATGTAACCCTTTCAGCTGTTACAGTAACAGCTGCTTCAGATTATACACCAGCTGAATTACAACAAGTTTATGAAATATTAACTACTCCTGATGTAGACAAGTTTACAATACAAGCTTCACGAGCAGAAGGAGGATCAGGTATGACTGCAGCAGGTGCAGCAACTGTTAATCCTTATGTTGAAGTAGGTCCTACTTTTCAAACTGCAGGTTATGGTTGGGGAACTTATTTATGGGGAGATTCTACTTGGGGAACTGAAAGAACAATAAGTAACGTGATTCTGGATCCAGGCAACTGGAGCCTAGATAACTTTGGTGAAGTTCTTGTTGCAACTATATTTAATGGTAAAACTTTTACTTGGAACGCTGGAGCATCAGGACCTAGAGGTATAAGAGCTTCACAGTCAACAACTAATTTTAACACAACAAACAATCCAACGGCTACAAGAATTTCTATTGTATCAGATAGAGATAGACACTTATTTCATTTAGGTACAGAAACAACTATAGGTGATCCTACAACACAAGACCCTATGTTTGTAAGATTTTCAAACCAAGAAGATTTAAATACATATGCACCTACAGCAACTAACACAGCTGGTACGTTTAGATTGGATACCGGTAATCAGATTAGAGCAGCTATACAAGGTAAAGATTATATCTTTGTAGCAACTGATCTTTCAGCTTATGTAATTCAATTTGTTGGTCCGCCATTTACTTTTTCTGTTAGACAAGTTGGTACTAACTGTGGATGTATTGGTCAACACGCTATGTCTTATGCAAATGGTGCTGTATGGTGGATGTCAGCAGAGGGTGGATTTTTTGTATATGATGGTACAGTCAAAACATTACCATCCCTTGTAGAAGATTTTGTATTTAGCACGGATGGAGATAATTTAGGTATTAATTTAAATTCAAGAGATGTTGTGTACTCTTCACCTAATTCTTTATACACAGAAATAAATTGGTTCTATCCAAAAGATGGATCTGATCAAATTGATAGATGTGTGACTTATAATTATAAAGAAAATGTTTGGACAACTTCATCATTAGCTAGAACTACATACACAGATCAAGGTGTGTTTAATGCTCCATATGCAACAGAATATACTAAAACAGCTACACCTGTATTTCCAGATATATTAGGTATTACAAATTTATATGGAGCTAGTATATACTATGCTCATGAAACAGGTACTGATCAAGTCAACAGCTCAGGCACAACTTCTATTGATGCATTTATTAGATCTGGAGATTGGGATATTACTTCAAGAACAAGTGGTTTAGGAGTACAGACTGGAGTCGCTGATTACAGAGGTGATGGAGAATACTTTATGTCTGTAAAACGATTTATACCTGATTTTAAATATCAAACAGGTAATGCTCAAGTAACTTTATTTGTAAGTAGCTATCCAGATGATGTAGCTGTCAGCTCACCTCTTGGGCCCTTTACAATAACTACTTCTACTGATAAGGTTGATACAAGAGCTAGAGGCAGATTAGTTTCTGTACAAATAGCCAACACAGCAGTAGGTGAGTCATGGAGATATGGCACACTTAGATTAGATGCACAACCAGACGGACGAAGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5e917574790daa9da36b948a62a739941981cbdf3cedac3b4daa8af1a12f3352
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7599
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Novel pelagiphages prevail in the ocean Zhang,Z., Qin,F., Chen,F., Chu,X., Luo,H., Zhang,R., Du,S., Tian,Z. and Zhao,Y. 2019 — GenBank