Protein

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Genbank accession
QKE11346.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,77
Protein sequence
MARLLGPTWIGGDKRLTHLYVSEPSFSGERYYKLATIDKGAGILNVRGILGGHTSTEGRAVVDVNIAARDGLSFNGLVAGRLDRSDIVVIDPGSSYNYVEVWLITKSWGLENLELSASGVVSIVYDGTYTTSPPAGPSWSYLSRYNNLSRHGGLLRVPSTPSDLSVSWSLGSGVSAVNSSAIIYKANVLLMSGGFVQILLRPVGLVYTVDTGFRGEGEIKFTLYPLEEFKKLGITKVDGLTNPAGVFTTVVTTSSIYHDNEYGLRDVDYYPSDGRLDIIVYRSRYTGADYGNLVTGVIYALLY
Physico‐chemical
properties
protein length:303 AA
molecular weight: 32865,77670 Da
isoelectric point:6,10106
aromaticity:0,10891
hydropathy:0,04554

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QKE11346.1
1 303
Domain Start End Length (AA) Confidence
N-terminal 1 128 128 0,2893
Central domain 129 292 165 0,0764
C-terminal 293 303 10 0,9567
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-128
Central
129-292
C-terminal
293-303

Taxonomy

  Name Taxonomy ID Lineage
Phage Thermus phage phiFa
[NCBI] 		1400796 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Thermus thermophilus HB27
[NCBI] 		262724 Bacteria > Deinococcus-Thermus > Deinococci > Thermales > Thermaceae > Thermus

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QKE11346.1 [NCBI]
Genbank nucleotide accession
MH673672.2 [NCBI]
CDS location
range 44214 -> 45125
strand -
CDS
ATGGCGAGACTACTTGGTCCTACATGGATTGGTGGGGATAAGCGCTTAACCCACTTGTACGTTTCTGAGCCTAGCTTTTCTGGAGAGCGTTACTACAAATTAGCGACTATCGACAAAGGCGCTGGTATTCTTAACGTGCGCGGTATTCTTGGCGGGCACACATCCACGGAAGGACGTGCTGTCGTTGATGTAAACATTGCGGCTCGAGACGGGTTAAGTTTTAACGGTTTGGTGGCCGGTAGATTGGACCGCAGCGACATCGTTGTGATTGACCCAGGCTCTTCATACAACTATGTGGAAGTGTGGCTCATCACAAAGAGTTGGGGACTGGAGAACCTAGAATTGTCTGCGTCCGGTGTTGTTAGCATTGTGTACGATGGTACATATACAACTTCACCTCCAGCCGGGCCGTCATGGTCCTACCTATCGAGATACAACAACTTGTCCCGGCACGGTGGACTGCTTCGGGTTCCAAGCACGCCTTCAGACCTCTCTGTGTCGTGGAGTCTGGGAAGCGGGGTATCTGCTGTAAACAGTTCGGCAATAATCTACAAAGCCAACGTACTGCTTATGTCTGGCGGCTTTGTGCAAATCCTCCTTAGGCCGGTCGGTTTAGTGTACACTGTGGATACAGGATTTCGTGGCGAAGGGGAAATTAAATTCACCCTATACCCGTTGGAGGAGTTTAAAAAGTTGGGCATAACGAAAGTCGACGGTTTAACTAACCCAGCAGGTGTCTTTACCACCGTGGTCACTACATCCAGCATTTACCACGACAACGAGTACGGCTTACGGGACGTTGATTATTATCCCTCCGACGGTCGTCTCGACATTATCGTTTACCGTTCGCGCTACACTGGCGCTGATTACGGCAACCTGGTCACTGGCGTCATTTATGCATTGCTTTACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f6746e2c7b96dab2563cd70f76069e5ed7cdb993eea9e6c26bce95b65c512ef1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3888
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Natural diversity of CRISPR spacers of Thermus bacteria, its variation between distant hot springs, and its role in a record of history of phage-bacteria interactions Lopatina,A. 2019-03-25 — GenBank