Protein

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Genbank accession
AFM10390.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MAIVPGQCGTCTNPAVALFFETVLPGEFSLTGYGSGQWVDTPLALALPEAGDWRVTADVRGQVNVSLTGNASVVVRLTVDGVPALNSERLVTRQTTNGLDLLGAASGNGATASLTTFVTTTGPATLAVQACRVYGGTNPVARLDSDGNGRTTLTAERVR
Physico‐chemical
properties
protein length:159 AA
molecular weight: 16294,13550 Da
isoelectric point:4,95348
aromaticity:0,05031
hydropathy:0,14340

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Saccharomonospora phage PIS 136
[NCBI] 		182851 No lineage information
Host Saccharomonospora sp.
[NCBI] 		33913 cellular organisms > Bacteria > Bacillati > Actinomycetota > Actinomycetes > Pseudonocardiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AFM10390.1 [NCBI]
Genbank nucleotide accession
JX006077.1 [NCBI]
CDS location
range 596 -> 1075
strand -
CDS
ATGGCGATCGTTCCCGGTCAATGCGGCACCTGCACCAACCCGGCAGTAGCGCTGTTCTTCGAGACGGTGCTGCCGGGGGAGTTCAGCCTGACCGGCTACGGCAGCGGCCAGTGGGTCGACACACCCCTGGCGCTGGCGTTGCCGGAAGCAGGGGACTGGCGCGTCACCGCCGATGTGCGGGGTCAGGTGAACGTGTCGCTGACCGGGAACGCCTCCGTCGTCGTCCGCCTCACCGTCGACGGCGTGCCCGCGCTCAACAGCGAACGACTGGTCACGCGGCAGACCACCAACGGTCTCGACCTGCTGGGCGCGGCGAGCGGGAACGGCGCCACCGCCTCACTCACCACGTTCGTCACGACCACCGGACCGGCCACGCTCGCCGTGCAGGCGTGCCGGGTCTACGGCGGCACCAACCCCGTCGCTCGCCTGGACAGCGACGGCAACGGACGAACCACGCTGACCGCCGAACGCGTCAGATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
5ebdbcf5595899d3dafa230d057cdb9c55131d0f9b596fc094dec9fce95f4cbf
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8671
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome Sequence of a Novel Actinophage PIS136 Isolated from a Strain of Saccharomonospora sp Bajpai,R., Soni,V., Khandrika,L., Jangir,P.K., Sharma,R. and Agrawal,P. 2012 22879621 GenBank