Protein

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Genbank accession
QJA18041.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MGFFAGKYSDGKTVLSLNKVNGGDINAHKTPNANTIFHSDMPFVLVESTYESALSSAGNGFFVCQMPSVIANLKSNDPGRVILTAVEINGTHRGFLNGTQSQVGQFLAFFEDPPIGRAGAEVGLTSAFASGNSLAHGTYTYNSSLGHEESIARQGTGGTISQASGFNLYRPGGAYAGEAIGRAWTLAGFPAGASKVSINSGNVDFWHPNWQAPIGAGKRGHTWFYVCNSNIRGYAGKKGTTPSNVSVLYNSSTYPNKVYVCRGSTSNLASQAAKKQYVQDSYNITPTKVIWYVLNLRYSNGGMSVASNPFTGSDIRISPSNFTIKGVSLPNTSYKFINQNAFGNLSSRPDMEYIGNNVAYTGVFGDTTARCEIVGSNKGSLWSPVNYGGSKSQISIYKFSAGKQWYVNSNNNTIGNEHGVVWGPSSVPLRLLPNNVASTYIGDDINPSYPGTGNKYVALSTVSLGLPNANSTVILTTEVVAGNLNTAGGPIRTYGGTAWQVQGRRQQSYTGGDGIFHQILTLPPNHLVPFHTTASYSYTQQWASRPDDLTFRRSGFIYTIKNLGNGNAELGVVIHANESAAVFLPRLRVTIQRLT
Physico‐chemical
properties
protein length:595 AA
molecular weight: 63703,25250 Da
isoelectric point:9,44986
aromaticity:0,10924
hydropathy:-0,24891

Domains

Domains [InterPro]
IPR059609
RBD
1–595
IPR059609
QJA18041.1
1 595
Architecture
RBD
RBD 1-595
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QJA18041.1
1 595
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0024
Central domain 11 209 200 0,0501
C-terminal 210 595 385 0,9902
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-209
C-terminal
210-595

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage vB_Sen_H9
[NCBI] 		2723909 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica
[NCBI] 		28901 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QJA18041.1 [NCBI]
Genbank nucleotide accession
MT233525 [NCBI]
CDS location
range 27942 -> 29729
strand +
CDS
ATGGGTTTTTTCGCTGGAAAATATAGTGATGGTAAAACTGTATTATCACTAAACAAGGTGAATGGTGGGGATATTAATGCTCACAAAACTCCTAACGCCAATACTATATTTCACTCTGATATGCCATTTGTTCTAGTTGAGAGTACTTATGAAAGTGCATTAAGTAGTGCTGGTAATGGGTTCTTTGTATGCCAAATGCCTTCTGTAATAGCTAATCTAAAGAGCAATGATCCTGGTAGAGTTATACTAACCGCTGTTGAAATTAATGGTACTCATCGTGGTTTTTTGAATGGTACTCAATCCCAAGTTGGACAATTTCTTGCATTTTTTGAAGACCCTCCTATTGGTAGGGCTGGTGCTGAAGTAGGTCTTACATCAGCTTTTGCATCTGGTAATAGTTTAGCACACGGTACTTATACTTATAACTCTAGTCTAGGCCATGAGGAGTCAATAGCTAGACAAGGTACTGGTGGTACTATATCACAGGCTTCTGGGTTTAACTTATACAGACCTGGAGGGGCATATGCCGGTGAAGCTATAGGTAGAGCATGGACTTTAGCAGGATTTCCAGCCGGAGCATCTAAAGTATCGATAAATAGTGGTAATGTTGACTTCTGGCACCCTAACTGGCAGGCTCCTATAGGGGCTGGAAAGAGAGGTCATACTTGGTTTTATGTTTGTAACTCCAATATACGTGGATATGCTGGTAAAAAGGGCACTACGCCAAGTAATGTTAGTGTACTATACAACTCTTCAACCTACCCAAATAAGGTTTATGTATGTAGAGGCTCAACGTCTAACTTAGCATCACAAGCAGCAAAGAAGCAGTATGTGCAAGATAGTTATAATATTACTCCAACCAAAGTTATCTGGTATGTGCTGAATCTTAGATACTCTAATGGTGGTATGAGCGTTGCTAGTAACCCATTTACTGGATCCGATATTCGTATAAGCCCTTCTAACTTCACTATAAAAGGTGTTAGTCTTCCAAACACTAGTTACAAATTCATTAATCAGAATGCTTTTGGTAACTTATCATCTAGACCTGATATGGAGTACATTGGTAATAACGTTGCTTATACCGGAGTCTTTGGAGACACTACAGCAAGATGCGAAATTGTGGGATCTAATAAGGGTTCCTTATGGTCTCCTGTAAACTACGGGGGTTCTAAGTCTCAGATAAGTATTTACAAATTCTCTGCGGGTAAACAATGGTACGTTAATTCCAACAATAATACTATAGGTAATGAGCACGGGGTTGTTTGGGGGCCTTCTTCAGTACCTTTACGATTACTACCGAATAACGTAGCTAGTACTTACATAGGTGATGACATAAACCCTTCTTACCCAGGTACAGGTAATAAGTATGTAGCCTTATCCACAGTAAGTCTTGGACTACCAAATGCAAACTCTACAGTAATCCTAACTACTGAGGTGGTTGCTGGAAATCTTAATACAGCAGGGGGTCCTATACGAACATATGGTGGCACTGCATGGCAAGTGCAGGGGAGAAGACAGCAAAGTTATACAGGGGGTGATGGGATATTTCATCAAATATTAACCCTACCTCCTAATCATTTGGTGCCATTTCATACTACAGCTTCCTATAGTTATACACAACAGTGGGCTAGTCGACCAGATGATTTAACATTTCGTAGAAGTGGATTTATCTATACTATTAAAAATCTGGGTAATGGTAATGCTGAGCTAGGTGTAGTTATACATGCAAATGAATCCGCCGCCGTCTTCTTACCTAGATTAAGAGTAACAATTCAACGCCTTACCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
cb4e6403a3ddc79410d00310e7a3ca63d5ccb656905c331a47875191d5963feb
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,2548
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50