Protein

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Genbank accession
QPB12435.1 [GenBank]
Protein name
straight tail fiber
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,91
Protein sequence
MAIQNTYEHVLDQAQYISFDPKGTDWPQNVKDVQKALAGLGSWAQKDKGLPNATETVKGILRLATEQETIDGILDNVAVSPKNLKKRLAYPEATESVLGLTRYATNAEATAGTAKNRSIVASSLKHVLDTRNATESVTGLLKISTTIQATQGTDDTTAMTPKKVKAAISALTPSYGIATETNSGTVTLATVGIAQAGTAHDGMAISPKIFVQSRASETKVGTTQFANQSQGLALSADNIAISPKVLGGIKGTASQFGLLKLTKTKSSSPNTALAGDADVVFLNGGNMTGRLKLNNEDYIIRSELTSALTSASLPIGFYAMAAYNPQAMYGGMWLPADGRFLNPTTYKALFDLIGYTYGRSGDNFALPNFNDLFPRAASPSRPAGKKEEYAVPKGLTGKFPSWDHWRSHGWTTGAFKLTGRRWNTNVKNGGGDDWGNEVEYNPQFAGVKVDSELRPANMAAWFVIRVK
Physico‐chemical
properties
protein length:467 AA
molecular weight: 49982,79480 Da
isoelectric point:9,32144
aromaticity:0,08137
hydropathy:-0,30814

Domains

Domains [InterPro]
DC_0176
STR
1–421
DC_0176
IPR037053
ATT
304–369
IPR037053
SSF88874
STR
311–466
SSF88874
IPR011083
ATT
333–374
IPR011083
QPB12435.1
1 467
Architecture
STR
ATT
STR
STR 1-303 | ATT 304-374 | STR 375-466 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Providencia phage PSTCR6
[NCBI] 		2783548 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Providencia stuartii
[NCBI] 		588 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QPB12435.1 [NCBI]
Genbank nucleotide accession
MW057858.1 [NCBI]
CDS location
range 129108 -> 130511
strand -
CDS
ATGGCCATTCAAAATACTTATGAACACGTTCTTGACCAGGCACAGTATATATCTTTTGATCCCAAAGGGACCGATTGGCCACAAAACGTAAAAGACGTCCAAAAAGCTTTAGCGGGTTTAGGAAGTTGGGCCCAGAAAGATAAAGGCCTTCCTAATGCCACAGAAACAGTTAAAGGTATTTTACGGCTTGCGACTGAACAAGAAACAATTGACGGGATTTTAGATAATGTCGCGGTTTCACCTAAGAATCTTAAAAAGAGATTAGCATATCCTGAAGCAACAGAATCAGTCTTAGGTTTAACGAGATACGCGACAAATGCTGAAGCCACTGCCGGTACGGCCAAAAATAGAAGTATCGTAGCATCGTCACTGAAACATGTTTTAGATACAAGAAATGCGACTGAATCCGTAACTGGTTTATTAAAAATTAGTACCACCATCCAAGCAACGCAAGGTACAGACGACACGACGGCGATGACTCCTAAAAAAGTTAAAGCTGCCATTTCTGCATTAACACCATCTTATGGTATAGCCACAGAAACTAATAGCGGTACAGTAACACTTGCTACGGTTGGTATTGCCCAAGCCGGTACCGCTCATGATGGAATGGCAATTTCTCCTAAAATTTTTGTGCAGTCTAGAGCATCAGAAACAAAAGTCGGTACAACCCAATTCGCCAATCAATCCCAAGGCCTAGCTTTAAGCGCAGATAATATAGCTATTTCACCTAAAGTCTTGGGTGGGATTAAAGGTACGGCTTCTCAATTCGGCCTTTTAAAACTTACTAAAACTAAATCATCTTCTCCTAATACGGCTTTAGCCGGTGATGCAGATGTTGTATTTTTAAATGGCGGCAATATGACTGGCCGTTTAAAATTAAACAACGAAGATTATATTATTCGTTCTGAATTAACGAGTGCATTAACTAGCGCGTCACTACCGATTGGGTTCTATGCTATGGCGGCTTATAATCCACAGGCTATGTATGGTGGAATGTGGTTACCCGCAGATGGCCGTTTCTTAAACCCGACAACATATAAAGCGTTGTTTGATCTTATTGGGTATACTTATGGCAGAAGTGGGGATAATTTTGCCTTGCCTAATTTTAATGATCTGTTCCCAAGAGCTGCTTCACCTTCTAGACCGGCTGGTAAAAAAGAAGAATATGCTGTTCCTAAAGGATTAACTGGTAAATTCCCATCATGGGACCATTGGCGTTCACATGGTTGGACTACTGGTGCATTTAAATTAACCGGGCGTAGATGGAACACTAACGTTAAAAACGGTGGTGGGGATGACTGGGGTAATGAAGTCGAATACAACCCACAATTTGCTGGGGTTAAAGTGGACTCGGAACTTAGACCGGCTAATATGGCGGCTTGGTTCGTTATAAGGGTAAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
da6be3a498cb52c0dd6b150cb75f5b89a7f656a168c8ba4eb31cc90a664b3c27
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7706
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Novel bacteriophages targeting Providencia spp. as potential agents for phage therapy Rakov,C., Alkalay-Oren,S., Coppenhagen-Glazer,S. and Hazan,R. 2021-04-02 — GenBank