Protein

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UniProt accession
A0A249Y293 [UniProt]
Protein name
Pectate lyase
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MVTKNTSYHPLMGDVEPATYYRRGSFQDGGFVQIPDDIIKHSDGNWYRYKNAIPAGGVPVLPGTSPDSNWELVGLRGDVVDRLGTTSGFRFVGQAASIAEVRAIEPTKPNERILMKQYGPIKGVGGGEFWYDELDTTTADNGGTILVTAGGKRWKKIMKDTGYSAEDFGADPNGVADSRAAIQAAIDFVGTLKNKILYLTGTYRIEGDTTITLANGVQLLGTRRGMTQGPQTVQGDTMRVVNDTTFHVAMTPGKTTPLFTAGRDAVFSGFSVVYINQPKEAATINDILTYGPTIWASHSCSVVNVRYVAAWDFFNGRGEAHFISDIYGYAFNVDFHIEMCADVTRLKNIHINSNVYRPGWSILDVAAPRVTSRAFEMVQHDGIMFEGIHVFAKGTVWHNRQNSTARLCSLNGTDFLFDKCGTMLDSDVNGGVCCSLSNGVFIHDYHTNEGAALNLTNPVGTQVTSYYLTDWKWQLGSAGTSPGQGSWAANWMNFNSAAGTRVWLDNINILAMGTLALNNNAQFNRVEGSVTIGTRKINFRPQNANLVENHRLVSIDPFTNIPYGFTKLGTAVTVSGRNVTSTAATSPTGLGISTRVAQTFPSSCAVWVYASQKGDSSGILVTAYLAGFTNPITFSAQWEAMGNSWLARLEVPSSAGRTHWDITANAPSATGGTLTIQSVHMIAGTTLEFSPESDSVAIHTNQVGALRGKMTLVANVPQELPSAHFGGDRGVISLYVKSATVVGYWVLNKRLIGDTGTVTQIAYAAGAETITVDWPAGSGAKPRVMSTAGGDVDVTITGV
Physico‐chemical
properties
protein length:799 AA
molecular weight: 85907,58330 Da
isoelectric point:6,38924
aromaticity:0,09512
hydropathy:-0,10976

Domains

Domains [InterPro]
cd20481
STR
90–602
cd20481 DC_2026
cd20481
STR
91–602
cd20481
IPR011050
STR
161–523
IPR011050
IPR012334
STR
163–450
IPR012334
IPR024535
ENZ
165–246
IPR024535
A0A249Y293
1 799
Architecture
STR
RBD
STR 90-602 | RBD 603-799
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
A0A249Y293
1 799
Domain Start End Length (AA) Confidence
N-terminal 1 175 175 0,9894
Central domain 176 541 367 0,9924
C-terminal 542 799 257 0,9953
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-175
Central
176-541
C-terminal
542-799

Taxonomy

  Name Taxonomy ID Lineage
Phage Serratia phage 2050H1
[NCBI] 		2024250 Uroviricota > Caudoviricetes > Pantevenvirales > Miltonvirus > Miltonvirus MAM1
Host Serratia marcescens
[NCBI] 		615 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0044423 virion component Cellular Component IEA:UniProtKB-KW (UniProt)
GO:0016829 lyase activity Molecular Function IEA:UniProtKB-KW (UniProt)
GO:0051701 biological process involved in interaction with host Biological Process IEA:UniProtKB-ARBA (UniProt)
GO:0019058 viral life cycle Biological Process IEA:UniProtKB-ARBA (UniProt)

Tertiary structure

PDB ID
9c6fa85819311adfdcc4ff5fb049b7aa2cd1b72b7160e0befc6e17babe7903cf
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7424
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50