Protein

View in Explore
Genbank accession
WWO60318.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MIPELTAAVAKAPWAQQMGRRTRPLINYMIGGNELGNGAAIAGTTWVVEYVAPEVRVYKQDSPEDFTVVLTKPDITFVNLAFDQSMRWVIGYTHDDKGYVYWYDSIVGQYATIEIPGSKRPYVSLDVRDVVYVGDSDVIISYTRDNNLYTRVQRERFQTERLLKTAAGSDLFRFGLSVINRLQWQVLP
Physico‐chemical
properties
protein length:188 AA
molecular weight: 21437,12590 Da
isoelectric point:5,86137
aromaticity:0,12234
hydropathy:-0,18989

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage SB4
[NCBI] 		3117473 No lineage information
Host Xanthomonas euvesicatoria
[NCBI] 		456327 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Lysobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WWO60318.1 [NCBI]
Genbank nucleotide accession
PP079415.1 [NCBI]
CDS location
range 38458 -> 39024
strand +
CDS
ATGATCCCTGAGCTGACCGCCGCCGTTGCCAAGGCACCGTGGGCACAGCAGATGGGACGCCGTACTCGCCCGCTGATCAACTACATGATTGGCGGCAACGAGCTTGGCAATGGTGCTGCAATCGCAGGCACCACGTGGGTAGTCGAGTACGTGGCACCCGAGGTCCGTGTGTATAAGCAGGACAGTCCGGAAGACTTCACAGTCGTCTTGACGAAGCCCGACATTACATTCGTGAACCTCGCGTTCGATCAGTCCATGCGATGGGTGATCGGATATACGCACGACGATAAGGGGTACGTTTACTGGTATGACTCAATCGTGGGGCAGTACGCAACGATTGAGATCCCCGGTAGCAAGCGCCCCTACGTGTCATTGGACGTGCGTGACGTGGTGTACGTAGGGGACTCCGACGTAATCATCAGCTACACCCGCGACAACAATCTCTATACCCGAGTACAGCGCGAGCGCTTCCAGACGGAACGCTTGCTCAAGACGGCAGCAGGATCTGACCTGTTCCGATTCGGGTTGTCTGTCATCAACCGCCTGCAGTGGCAGGTGCTTCCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4513544a815adb3e6b2e290a04100dbc9e21b359cad4a85caf7037423b58f94f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6806
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Novel lytic viruses for Xanthomonas sp. and Stenotrophomonas maltophilia Petrzik,K., Brazdova,S., Sovova,L. and Neoralova,M. 2023-07-17 — GenBank