Protein

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Genbank accession
QGH45136.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MAGLTKLTRVTSRLVTFMVRKLHDKLRDTLSILDYEKTGTEQDRWIAAITDLQSKGGGTLLVPAGTYTFTGPVSASLTTRVCIKFQPGASLNQTVDSHLFNFTSTSGGSLDVQGPGVITALFSAKSASSAAIKFVGTGRVRSFICTGSLEIHADETTVSQFKYGMHLTDVQDGVIRDTLFSALQGTYFGTALYITAVNGASVSWTIDGIDSYNHEVDIDVAGTRSPGVEGIKLINCDLVSSKHGFRWINTASYVPPQLEMVGCHVNTKSAGVILTNVMQIHVSGGLFYRSITTVLDPADIARGFFEFNNAQDWSIMGASMSVVHSSINVPAILINGTTNAFGRIDGTHFWMNGRDKAFIKIIGSITRLQLGSGCTKDTSGQWIDLSEFTGNHGQIQISDDIRLTALDLSTIGNVFVDASSGTVDLRPVKRGILTLDNVTESSVVTAFQSPEIGRVYTIVCSTAGVTIQRNSGILLRDTGNFIFHQAGETLTIVVTADGIVRELARSNPLNFRGSLAATTTTPSIAAGASAMVATGTITGMKVTDGFVFKTSDAYTGFILSVVKTGASTFQVYATNVTAGALTFPSLTITVRAANF
Physico‐chemical
properties
protein length:595 AA
molecular weight: 63343,16260 Da
isoelectric point:6,86379
aromaticity:0,08067
hydropathy:0,17126

Domains

Domains [InterPro]
DC_1079
STR
18–499
DC_1079
IPR012334
STR
42–315
IPR012334
IPR011050
STR
47–267
IPR011050
QGH45136.1
1 595
Architecture
STR
STR 18-499 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QGH45136.1
1 595
Domain Start End Length (AA) Confidence
N-terminal 1 40 40 0,9704
Central domain 41 409 370 0,9929
C-terminal 410 595 185 0,9895
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-40
Central
41-409
C-terminal
410-595

Taxonomy

  Name Taxonomy ID Lineage
Phage Ralstonia phage Reminis
[NCBI] 		2662139 Uroviricota > Caudoviricetes > Autographivirales > Reminisvirus > Reminisvirus reminis
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QGH45136.1 [NCBI]
Genbank nucleotide accession
MN478376.1 [NCBI]
CDS location
range 41165 -> 42952
strand -
CDS
ATGGCTGGTTTAACTAAGCTCACAAGAGTGACATCACGTCTTGTGACATTTATGGTAAGAAAGCTTCATGATAAGTTAAGGGACACTTTAAGTATCCTAGACTATGAGAAGACAGGAACAGAGCAAGATAGATGGATTGCAGCCATTACAGACTTACAAAGTAAGGGTGGTGGTACTTTGCTAGTACCAGCTGGTACGTACACATTCACTGGCCCTGTTTCTGCGTCTCTGACAACTCGGGTATGTATAAAGTTTCAGCCCGGTGCATCTTTAAATCAAACTGTAGATTCTCATCTATTTAACTTCACTTCAACCAGTGGAGGCTCGCTTGATGTTCAAGGGCCGGGTGTAATAACAGCCTTGTTCTCTGCAAAGTCAGCATCATCAGCTGCTATTAAATTTGTTGGCACTGGACGGGTAAGGTCTTTTATTTGTACTGGTAGCCTTGAAATACATGCAGATGAAACAACAGTCAGTCAGTTTAAGTATGGTATGCATCTTACAGATGTTCAAGATGGTGTAATACGTGACACATTATTCAGCGCACTACAAGGTACTTACTTCGGTACTGCACTCTATATAACTGCTGTAAATGGGGCATCAGTATCTTGGACTATAGACGGGATTGATTCTTATAACCATGAGGTGGATATAGATGTTGCTGGTACTCGTAGCCCAGGTGTCGAGGGTATCAAGCTAATCAACTGTGACTTAGTAAGCTCTAAGCATGGTTTCCGCTGGATTAATACAGCATCATATGTACCACCTCAGCTTGAGATGGTTGGTTGCCACGTCAACACGAAGAGTGCTGGTGTGATACTTACTAACGTCATGCAAATACATGTAAGTGGTGGACTCTTCTACCGAAGCATCACTACAGTATTAGACCCAGCTGACATAGCTCGTGGATTCTTTGAATTCAATAATGCACAGGACTGGTCTATCATGGGTGCTTCTATGTCCGTAGTTCACTCTAGCATCAACGTACCTGCTATTCTTATCAACGGTACAACTAATGCTTTTGGTAGGATTGATGGAACACACTTCTGGATGAATGGACGTGATAAGGCTTTCATCAAGATTATTGGTAGCATTACAAGATTGCAGCTTGGTTCAGGGTGTACTAAAGATACGTCAGGCCAGTGGATAGATCTATCAGAGTTTACTGGTAACCACGGTCAGATTCAAATATCAGATGACATCCGATTAACAGCTTTAGATTTATCAACTATAGGTAACGTGTTTGTTGATGCAAGCTCTGGTACTGTTGACCTACGTCCTGTTAAAAGAGGCATTCTTACATTAGATAATGTCACTGAGTCAAGTGTTGTTACTGCATTTCAGTCACCAGAGATTGGCAGAGTGTACACCATAGTATGCAGCACAGCTGGTGTTACTATACAACGTAACTCAGGCATCTTGCTAAGAGATACTGGTAACTTTATTTTCCACCAAGCTGGTGAGACATTAACTATTGTTGTTACAGCTGATGGTATTGTACGTGAGCTTGCTAGGAGTAACCCTCTTAACTTTAGAGGTTCATTAGCTGCCACAACTACAACACCTAGTATCGCTGCTGGTGCATCTGCTATGGTAGCTACTGGTACTATAACTGGTATGAAAGTTACTGATGGTTTTGTATTTAAGACATCAGATGCTTATACGGGATTTATTCTGTCAGTGGTTAAGACAGGTGCTTCAACCTTTCAGGTTTATGCCACTAACGTTACTGCTGGGGCGTTAACCTTCCCTTCACTTACTATTACAGTTAGGGCTGCTAACTTCTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
8e9efdd7c5a0431e66e79975837194910eb162436d4e65460385c2ce4e4c2d30
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8517
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Bacteriophage as agents antimicrobiens Lightbourn,L., Amarillas,L., Estrada,M., Leon,R., Figueroa,L., Patron,O. and Leon,J. 2020-04-04 — GenBank