Protein

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Genbank accession
QXO06002.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,85
Protein sequence
MIEPKREPTQDFFVCLLKEPRWVSTDDLYAILLSPGVTYPAEIAMMHPDFFGGDDVVFKPEPPIDPDNPDLSNYYTKPETNNLLDQKADKIHTHVVADITDLNLDKFATKEETYTKQEIDDKIDEIVPPEIDLTDYAKKDAVNIFTKANTFTEAPSVEVDATLDNHVIRKKQFDNNIKEVKDLLSNVFSYKGSKSTYTEIEAIVDKKIGDVWYAEDTGYMYIWNGKTWYDLGKSFDASKFVDITSDQVAINGIKKFTGKLKALTPVDSDDVAILSWTTKQINDKVESVIGDLNSLNNEVSKDNLVNAINSVDDKFKTTAKTNKSNTFTGDQTYVDHILLESVPSERNHAVNLGYILDNPGGIKLPDHTALTQSSVTEITFGYANPVSYSAQQLKNVFLKDIVGNEYKAIMADKTSFTENPSKEMVVILSRTDYTKNIDVKFDITKTVDELKQYELKEGEVRVILSYDTISVYSSGYGYGAMFARNANKKDGDLIYDYYTGSQNDITNNRKVSIKIDKLGINTPDIVSISMTTNGSEKLTVKTDTLDPVENTYESADMTYIHTPVSKIAGDILYSNISQAIKSIHLLENNICSLKPASMELQLVRLKELNQTINNMLQSMFDESPIALENGDYIDVSFSGSASYGTGYCGYVNIKDTIRDITYKAYKVSSNAFNTTSGTKVIAVLTSDNSKTNVTYSDSVSTLESYEVAENEILLEISFSTAKQYSSKYGYGAMLEYWGSVSDLCYDYYMGSNLDMDCPFKITLLKIGSSVKADTIQIGAPTFAGSLVMHLRKNTNDVINFLVSTGMNVTGRDGTESGSVYNLVEKSLKPLKVLTSEAHQSINGITTFNNKVYMNIENERITDNKQLIHKEYLDKNITDNVAYNISNTPLIPYTDVSSLNNKKNICKNICDN
Physico‐chemical
properties
protein length:911 AA
molecular weight: 101801,11230 Da
isoelectric point:4,82810
aromaticity:0,09111
hydropathy:-0,39122

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QXO06002.1
1 911
Domain Start End Length (AA) Confidence
N-terminal 1 518 518 0,7334
Central domain 519 717 200 0,3234
C-terminal 718 911 193 0,4183
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-518
Central
519-717
C-terminal
718-911

Taxonomy

  Name Taxonomy ID Lineage
Phage Campylobacter phage CJLB-10
[NCBI] 		2780167 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Campylobacter jejuni
[NCBI] 		197 cellular organisms > Bacteria > Pseudomonadati > Campylobacterota > Epsilonproteobacteria > Campylobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QXO06002.1 [NCBI]
Genbank nucleotide accession
MW074124.1 [NCBI]
CDS location
range 55974 -> 58709
strand -
CDS
ATGATAGAACCAAAAAGAGAGCCTACACAAGACTTTTTTGTATGTTTATTAAAAGAACCTAGATGGGTTAGTACTGATGATCTATATGCTATTTTGTTATCACCAGGAGTTACATATCCAGCCGAAATAGCTATGATGCATCCTGATTTTTTCGGTGGTGATGATGTTGTATTTAAGCCTGAACCTCCAATTGATCCAGATAATCCTGATTTATCTAACTATTACACAAAACCAGAAACAAATAATTTATTGGATCAGAAAGCAGATAAAATTCATACACATGTTGTAGCTGATATAACAGATTTAAATTTGGATAAATTTGCTACAAAAGAAGAAACATATACTAAACAAGAGATAGATGATAAAATAGACGAAATAGTACCACCTGAAATTGATTTAACTGATTATGCAAAGAAAGATGCAGTTAATATTTTTACAAAAGCTAATACTTTTACAGAAGCACCTTCAGTAGAAGTAGATGCAACACTAGATAATCATGTTATTAGAAAGAAACAGTTTGACAATAACATAAAAGAAGTTAAAGATCTACTATCTAATGTATTTTCATATAAAGGATCAAAATCTACATATACAGAAATAGAAGCCATTGTTGATAAAAAGATAGGTGATGTATGGTATGCTGAAGATACTGGATATATGTATATATGGAATGGTAAAACTTGGTATGATTTAGGTAAATCTTTTGATGCTAGTAAATTTGTTGATATAACTTCAGACCAAGTAGCAATAAATGGTATTAAAAAATTCACAGGAAAATTAAAAGCATTAACACCTGTTGATTCTGATGATGTGGCTATTTTGAGCTGGACAACAAAACAAATAAATGACAAAGTTGAATCTGTTATTGGTGATTTAAATTCATTAAATAATGAAGTTTCTAAAGATAATTTAGTTAATGCTATAAATAGTGTAGATGATAAGTTTAAAACAACAGCTAAAACCAATAAATCAAATACATTTACAGGTGATCAAACTTATGTAGATCATATTTTACTAGAATCTGTTCCTTCTGAAAGAAATCATGCAGTTAATTTGGGATACATTTTAGATAATCCTGGAGGTATAAAACTTCCTGATCATACAGCACTTACACAAAGTTCTGTTACAGAAATAACTTTTGGATATGCAAATCCAGTATCATATTCTGCACAACAATTAAAAAATGTATTCCTAAAAGATATAGTAGGCAATGAATATAAAGCTATAATGGCAGATAAAACATCATTTACAGAAAATCCTTCAAAAGAAATGGTTGTTATACTTTCTAGAACTGATTATACAAAAAATATAGATGTTAAGTTTGATATTACTAAAACAGTTGATGAGCTTAAACAATATGAGCTTAAAGAAGGAGAAGTTAGAGTTATACTATCTTATGATACTATATCTGTTTATTCTAGTGGATATGGTTATGGAGCTATGTTTGCTAGAAACGCTAATAAAAAAGACGGAGACTTAATATATGATTATTATACTGGAAGTCAAAATGATATAACAAATAATAGAAAAGTATCTATAAAAATAGATAAACTTGGTATCAATACTCCAGATATTGTAAGTATATCTATGACTACAAATGGTTCTGAAAAATTAACTGTAAAAACAGATACACTAGATCCTGTAGAAAATACATATGAATCTGCGGATATGACTTATATTCATACTCCTGTCAGCAAAATTGCAGGAGATATTCTGTATAGTAATATATCTCAAGCAATTAAATCAATACATTTATTAGAAAATAATATATGTTCTTTAAAGCCTGCAAGTATGGAATTACAACTTGTAAGACTCAAAGAACTTAATCAAACAATAAATAACATGTTGCAATCTATGTTTGATGAGAGTCCTATAGCACTAGAAAATGGAGATTACATAGATGTTTCATTTAGTGGTAGTGCAAGTTATGGAACAGGATATTGTGGGTATGTTAATATAAAAGATACTATAAGAGATATTACATATAAAGCTTATAAAGTATCTTCAAATGCTTTTAATACAACTAGTGGAACTAAAGTTATTGCAGTTCTCACTTCTGATAACAGTAAAACAAATGTAACTTATTCCGATAGCGTATCAACATTAGAATCTTATGAAGTAGCAGAAAATGAAATATTATTAGAGATATCATTTTCAACTGCTAAGCAATATTCTTCTAAATACGGGTATGGAGCTATGTTAGAATATTGGGGTTCTGTATCTGATTTATGCTATGATTACTATATGGGTTCAAATCTAGATATGGATTGTCCATTTAAAATAACATTGCTCAAAATAGGAAGTTCTGTTAAAGCTGATACTATACAAATAGGTGCTCCTACTTTTGCAGGATCATTAGTTATGCACCTAAGAAAAAATACAAACGATGTTATTAATTTCCTTGTATCTACAGGTATGAATGTAACAGGAAGAGATGGGACTGAAAGTGGATCAGTATATAATTTAGTAGAAAAATCATTGAAACCATTAAAAGTTCTAACATCTGAAGCACATCAATCTATAAATGGTATAACTACTTTTAATAATAAAGTGTATATGAATATAGAAAATGAAAGAATTACAGACAACAAACAACTAATACATAAAGAATACCTAGATAAAAATATTACAGATAATGTAGCATATAATATTAGTAATACTCCATTAATACCTTACACTGATGTTAGTTCTTTAAACAATAAAAAAAATATCTGTAAGAATATCTGCGACAACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
cd46048d12a83eee0ad6f2eecb6ca61bde3909b7748f72a1e2b2f5c4ae39b4d5
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5452
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Bacteriophages are an effective tool to reduce Campylobacter contamination in foods Vikram,A., Woolston,J. and Sulakvelidze,A. 2017-11-23 — GenBank