Protein

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Genbank accession
QDK01996.1 [GenBank]
Protein name
minor tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MEFRTADGERPGRIFLPGGEEAIAIYAGNELVWAKFRSSNVEVPRANIKLFAYTPSLYTESATVVSVPRALMKIIGYAPTVSGDLAVNSQVPRANLKIVGYAPTVTADRKVDVTVPRADVILNAFTPTATGGISSNVDAPFALMKITAYAPTVDTKRAVEITPPRADIILSAFTPNVSALRRVDIDPNRANLVITGYAPTVEINERIDITPPRANMVIRAYAPADVMAQRAVEITPPRANVILTAPAPTVIGGISVNITPPRADMIIRGYAPSFPTYQFDNATSLENSGSTTTFNLTVGAGAALIVFAAGNATTGARVDGVSMTALASTSNGIMYGITGLSAGVKSIAVDRSSTGSFVICAASYTGVTNISGVVTGSGSNASPTISPTGSGGIVVGGFDFTASNIATVGGVDNLRAAYRRTTGNCAAISDRLVAPVGLTGTGATGNNYTAIGARLT
Physico‐chemical
properties
protein length:456 AA
molecular weight: 47040,93670 Da
isoelectric point:9,16091
aromaticity:0,06360
hydropathy:0,20680

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QDK01996.1
1 456
Domain Start End Length (AA) Confidence
N-terminal 1 301 301 0,9123
Central domain 302 445 145 0,0671
C-terminal 446 456 10 0,9971
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-301
Central
302-445
C-terminal
446-456

Taxonomy

  Name Taxonomy ID Lineage
Phage Gordonia phage Gibbles
[NCBI] 		2593334 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QDK01996.1 [NCBI]
Genbank nucleotide accession
MN096363 [NCBI]
CDS location
range 39609 -> 40979
strand +
CDS
ATGGAATTTCGTACAGCAGACGGTGAGCGACCGGGTAGAATATTTCTACCCGGCGGTGAAGAAGCCATTGCTATTTATGCTGGCAATGAGCTTGTGTGGGCAAAATTTCGGTCCTCGAACGTAGAGGTACCAAGGGCTAATATAAAGCTGTTCGCATACACTCCGTCGCTGTACACCGAAAGCGCAACCGTTGTATCAGTGCCTAGAGCATTGATGAAGATTATCGGCTATGCGCCAACCGTTAGCGGTGATTTGGCTGTTAATAGTCAGGTGCCTAGGGCTAATCTAAAAATCGTGGGTTATGCGCCTACGGTTACTGCTGACCGTAAGGTTGATGTAACAGTACCTCGTGCTGATGTTATTCTGAACGCATTTACACCTACGGCCACCGGTGGAATATCTTCCAATGTCGATGCACCATTTGCATTGATGAAGATTACAGCATATGCACCTACCGTCGACACAAAGCGTGCTGTGGAGATTACACCGCCGCGTGCTGATATTATTCTATCTGCATTTACGCCGAATGTTTCTGCTCTGAGAAGGGTAGACATTGATCCTAATCGAGCTAATCTTGTAATTACTGGGTATGCTCCGACTGTAGAGATTAATGAGCGTATCGACATAACACCGCCGCGCGCCAATATGGTTATCAGGGCATATGCGCCCGCCGACGTGATGGCTCAGCGCGCCGTGGAGATCACGCCTCCGCGTGCCAACGTGATCCTGACTGCCCCAGCCCCCACTGTTATAGGGGGAATCTCGGTCAATATTACACCGCCGCGTGCTGACATGATTATTAGGGGTTATGCGCCTAGTTTCCCGACGTACCAGTTTGATAATGCTACATCTTTGGAGAACTCCGGCTCTACCACTACATTTAATCTCACAGTTGGTGCCGGTGCTGCATTGATTGTGTTTGCTGCTGGTAATGCCACTACCGGTGCTCGTGTCGATGGTGTTTCAATGACAGCACTAGCTTCAACGTCTAATGGTATTATGTATGGAATTACCGGCCTCTCGGCTGGTGTGAAAAGTATTGCTGTTGATAGGTCCAGCACAGGATCGTTCGTTATCTGTGCTGCATCATACACTGGGGTCACAAACATTTCCGGCGTTGTTACCGGAAGTGGAAGTAATGCAAGTCCGACGATTTCTCCGACTGGCTCTGGCGGAATTGTTGTCGGCGGATTTGACTTTACCGCGTCGAATATTGCAACTGTCGGCGGTGTTGATAATTTACGTGCAGCTTACCGTAGAACAACTGGTAACTGTGCCGCAATTTCAGACAGACTTGTTGCACCAGTTGGCTTGACTGGAACCGGCGCAACCGGTAATAACTACACCGCAATTGGCGCTAGACTTACGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
dfc286ffc559efd8a8c1722fec887c4091e30c57d4c6704dd0480c427b5b4c41
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6028
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50