Protein

View in Explore
Genbank accession
XZE13838.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,93
Protein sequence
MSTINANDLPFLILSDFSDGDAFLILDNGKLKKITRKSLYEDIVPNLRGQKGDTGATGAQGIQGIQGIQGVKGDTGEKGDAGVAGVQGLDGEQGDHGWSPLIRVEVLPEGQFLYVYDWVGGEGDKPSSVGYITRGGLSESIDYQVNIKGEQGIQGIQGDRGASGTNGESNYQIARRNGYTGTEPEWLLTQIGKNNYELAVQDGYTGTLTQWLNEITHQDAYALAVENGFVGTLDDWIESLEGDNAWSPNLVTESDGTDIFIKIGDWFGGEGAKPPVGDYMSDEVTGDPTNFRGLKGDKAWYPLYQIEEVSDDVFMKIVDWAGGEGTKPTDTGYLSSTGLVPTTATAINIRGYEGLSAYDIATTNGFVGTEVEWLASLKGEKGDTGDKGYTPLLSTEIDSNGIYIKVMSYINGEGTEPTELGYLASTGLVALKEDATNFNPPIETISTTTITNNKVNVITATENTTITSDLTVGQSTEALINPSTFTITFDSITLSDGFSLTAEKDHLVKVFNYDGVIKATILATF
Physico‐chemical
properties
protein length:525 AA
molecular weight: 56220,29280 Da
isoelectric point:4,21259
aromaticity:0,08952
hydropathy:-0,31429

Domains

Domains [InterPro]
DC_0863
STR
25–236
DC_0863 DC_0863 DC_0863
IPR008160
STR
48–97
IPR008160
IPR050149
Unmapped
49–387
IPR050149
XZE13838.1
1 525
Architecture
STR
STR
STR 25-236 | STR 283-524 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Acinetobacter phage vB_AciJM_313
[NCBI] 		3456261 Viruses >
Host Acinetobacter johnsonii
[NCBI] 		40214 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Moraxellales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XZE13838.1 [NCBI]
Genbank nucleotide accession
PX050566.1 [NCBI]
CDS location
range 68628 -> 70205
strand -
CDS
ATGTCAACTATTAATGCAAATGATTTGCCGTTTTTAATTCTTTCTGATTTCAGTGATGGTGACGCATTCCTGATTTTAGATAACGGTAAATTAAAGAAAATTACAAGAAAGTCTCTTTATGAAGACATCGTACCAAACCTTAGAGGTCAGAAAGGTGACACAGGTGCTACAGGCGCTCAAGGTATTCAAGGTATTCAAGGTATTCAAGGTGTAAAAGGTGATACTGGTGAAAAAGGTGATGCTGGTGTCGCTGGTGTTCAAGGTTTAGATGGTGAGCAAGGTGATCACGGATGGTCTCCATTAATTCGTGTTGAAGTGCTTCCAGAAGGTCAATTCCTTTATGTTTATGATTGGGTTGGTGGAGAAGGAGACAAACCTAGTTCAGTTGGTTATATCACTAGAGGTGGATTATCTGAAAGTATTGACTATCAAGTAAACATTAAAGGTGAGCAAGGTATTCAAGGTATTCAGGGAGACCGTGGTGCTTCTGGTACAAACGGTGAATCAAACTATCAAATCGCTAGAAGAAACGGATATACAGGAACAGAGCCAGAATGGTTACTAACTCAAATTGGTAAGAATAACTATGAGTTAGCCGTTCAAGATGGATACACAGGAACTCTTACACAGTGGTTAAATGAAATAACGCACCAAGATGCATATGCGTTAGCCGTTGAGAATGGTTTTGTTGGAACACTTGATGACTGGATTGAAAGCCTTGAAGGTGACAATGCTTGGTCTCCAAATCTAGTAACCGAATCTGACGGAACAGACATCTTCATTAAGATTGGTGATTGGTTCGGTGGTGAAGGTGCTAAGCCTCCTGTTGGCGATTACATGAGTGACGAGGTTACTGGTGATCCGACAAACTTTAGAGGTTTGAAAGGTGATAAGGCTTGGTATCCATTGTATCAAATTGAAGAAGTCAGTGATGATGTCTTTATGAAGATCGTGGATTGGGCTGGTGGCGAAGGTACTAAACCAACGGATACTGGTTACTTGTCTTCAACTGGATTAGTGCCAACAACAGCGACAGCTATTAACATCCGTGGTTACGAGGGACTATCAGCATATGATATTGCAACGACTAATGGTTTTGTTGGAACAGAAGTAGAATGGCTTGCTTCACTTAAAGGTGAAAAAGGTGATACTGGTGATAAAGGATATACGCCTCTATTATCTACAGAAATCGATTCTAACGGTATCTACATCAAAGTTATGTCATATATCAATGGTGAAGGAACTGAGCCAACAGAGCTTGGATACTTAGCATCTACAGGTCTTGTTGCACTTAAGGAAGATGCTACAAACTTCAACCCACCAATTGAAACAATATCAACAACAACAATTACAAACAATAAAGTAAACGTTATTACAGCTACAGAGAACACAACAATTACAAGTGATCTAACTGTTGGTCAATCAACAGAAGCCTTAATTAACCCAAGCACTTTCACAATAACTTTTGACTCAATAACCCTGAGTGATGGATTTTCCTTAACTGCGGAAAAAGATCATTTGGTTAAGGTGTTCAACTACGATGGTGTGATAAAAGCCACTATCTTAGCAACCTTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
230c84f6be78bd79e35cc9a8a8a04255a53f3a46f5ae7344d9153889e0c7a19c
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,5870
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Novel Acinetobacter Johnsonii Phage AciJ_313 is Presumably a Representative of a New Family Ponomarev,A.L., Kozlova,Y.N., Ushakova,T.A., Fedorets,V.A., Bardasheva,A.V., Babkin,I.V., Morozova,V.V. and Tikunova,N.V. 2023 — GenBank