Protein

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Genbank accession
AIM51494.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MQEMNLNRRPYWDDWNPEKRFSRILFRPAPIKVQTRELNQMQTIFQDQLEKLGNHLFKDGSMVIPGGLTITNTAVSMKFTLAGGTEFTDLENIAELYVLGKDNNAKARVLSLERYVSEPDTMYAILEMTESGSSDGFGVSDNLYFNTYDVNDNFIRIGYGIAATVGGSIVARMTKGVYFVRGMFLDVEPATLIVDKTSNSTSHRVGFKVTETIVTEVEDESLFSNAQGTPNSKAPGAHRFRVDLVLSRFDYNEEVSNFVELAKVKDGRIQSMVTQSTYNILEDSMAQRTYETNGDYNVSTHQIDLREHLKENNNGGVYTA
Physico‐chemical
properties
protein length:320 AA
molecular weight: 36062,98140 Da
isoelectric point:5,04477
aromaticity:0,09688
hydropathy:-0,41875

Domains

Domains [InterPro]
IPR032096
STR
10–74
IPR032096 IPR032096
IPR032096
STR
10–70
IPR032096 DC_0414
AIM51494.1
1 320
Architecture
STR
STR 10-319 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Dickeya phage phiDP10.3
[NCBI] 		1542132 Uroviricota > Caudoviricetes > Pantevenvirales > Aglimvirinae >
Host Dickeya sp.
[NCBI] 		1914291 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AIM51494.1 [NCBI]
Genbank nucleotide accession
KM209248.1 [NCBI]
CDS location
range 1 -> 959
strand -
CDS
ATGCAAGAAATGAACCTCAACCGCCGCCCGTACTGGGATGACTGGAATCCAGAGAAGCGGTTTTCGCGCATCTTATTCCGTCCGGCACCTATCAAAGTTCAGACGCGTGAACTAAACCAGATGCAGACCATCTTCCAGGACCAACTGGAGAAACTTGGCAATCATCTATTCAAAGACGGTTCCATGGTTATCCCAGGTGGCCTGACGATCACCAACACTGCAGTGTCCATGAAGTTCACTCTGGCTGGCGGTACTGAGTTCACCGACCTGGAAAACATCGCAGAACTGTACGTCCTGGGTAAAGACAACAACGCCAAGGCGCGTGTACTGTCCCTGGAGCGCTATGTTTCAGAACCCGACACGATGTATGCCATTCTGGAGATGACTGAAAGCGGTTCCTCTGACGGCTTTGGTGTTAGTGACAATCTGTATTTCAACACATACGACGTGAACGATAACTTCATTCGTATCGGTTATGGCATTGCTGCGACTGTCGGCGGTTCTATCGTTGCTCGCATGACCAAAGGCGTTTACTTCGTCCGTGGCATGTTCCTGGATGTTGAGCCAGCGACTCTGATTGTGGACAAGACATCCAACTCCACTTCGCACCGCGTGGGCTTCAAAGTAACAGAGACCATCGTCACTGAAGTAGAAGACGAAAGTCTGTTCTCCAATGCTCAGGGAACCCCAAACTCTAAAGCCCCCGGCGCGCATCGTTTCCGCGTGGACCTGGTATTGTCCCGCTTCGATTATAACGAAGAAGTGTCCAACTTCGTTGAACTAGCGAAGGTGAAGGATGGTCGCATTCAGTCCATGGTGACTCAGTCCACGTACAACATCCTCGAAGACAGTATGGCACAGCGTACCTATGAGACCAACGGGGATTACAACGTCTCTACTCATCAGATCGACCTGCGCGAGCACCTGAAAGAGAACAACAACGGTGGGGTCTACACTGC

Genome Context

Genome Context

Tertiary structure

PDB ID
abad9725273686d1675d78918bbc1f75e2f891a577ed98dbe099916e3e1d057a
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8577
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic, proteomic and morphological characterization of two novel broad host lytic bacteriophages PhiPD10.3 and PhiPD23.1 infecting pectinolytic Pectobacterium spp. and Dickeya spp Czajkowski,R., Ozymko,Z., de Jager,V., Siwinska,J., Smolarska,A., Ossowicki,A., Narajczyk,M. and Lojkowska,E. 2015 25803051 GenBank