Protein

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Genbank accession
QXV83762.1 [GenBank]
Protein name
lateral tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSTTITNLPETSKVNGSDYLVLDQSDKTVKSTVSKFLTDTGVVLATQLKDTDGADLIQSSNGNTVQEELNNNLLNDREQWRRSLAEAGLTLVDGSFEEGATLNNNTDAVWYIAAGQCYSWDGAFPKTVAAGSTPTSSGGVGLGAWVSVGDASLRKELSSNYGAGLIKTTNGDSVQSELDTLRLSDSAEKIAANLLLGSAKVIDSVSSADSFILPSFATLEGGDNFLTGFIGTTYQKNKTIRKSSNTTVTLTNQDPTASSQTVDAVVYQDPSWPGGRVFPQKSALKHITVEGNSAANPSQAGFFVLQAGVVDIENVDFINCTYAIWAKDIWQSRISRVFSNNGKIRLDNGTSVVLTGCGLASADTGRTGAFDLTGMKYSTLIGCTSDHTTNTAYSFDACEGIVLDACGCEGANTTTANAGTALAFKDNNHNIVVNAFTCFPVADQGPALISFGSNNQVTLNSFEVIPGITYNGDIYLYGANSHITINGGRFGSSGNAMPIVIASAAAVGSTVTYHHRRGITYTYRVTEAGVVSPVQHFRPIVSAIIAASGDVVSGFGVNSVTKNSTGSYTINFTSEVATGYHIQQLSSFGFQQVSTFDNTSLTVTLISPDKIPTDSAFSININGW
Physico‐chemical
properties
protein length:624 AA
molecular weight: 65739,97590 Da
isoelectric point:4,83372
aromaticity:0,08333
hydropathy:-0,07404

Domains

Domains [InterPro]
DC_1953
STR
4–623
DC_1953
G3DSA:2.10.10.80
ATT
89–160
G3DSA:2.10.10.80
IPR040775
RBD
93–150
IPR040775
QXV83762.1
1 624
Architecture
STR
ATT
STR
STR 4-88 | ATT 89-160 | STR 161-623 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QXV83762.1
1 624
Domain Start End Length (AA) Confidence
N-terminal 1 185 185 0,9963
Central domain 186 516 332 0,9901
C-terminal 517 624 107 0,9578
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-185
Central
186-516
C-terminal
517-624

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage PaulScherrer
[NCBI] 		2852032 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli K-12
[NCBI] 		83333 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QXV83762.1 [NCBI]
Genbank nucleotide accession
MZ501100.1 [NCBI]
CDS location
range 24095 -> 25969
strand +
CDS
ATGTCAACTACAATTACTAATTTACCCGAAACATCAAAAGTTAATGGTTCTGATTACCTGGTTTTAGACCAATCTGATAAGACTGTTAAAAGCACAGTTTCCAAATTTCTTACTGACACTGGGGTGGTTTTAGCCACCCAGTTGAAAGATACAGATGGAGCAGATTTAATACAATCCTCAAATGGTAATACTGTTCAGGAAGAGTTGAATAACAATCTTCTTAATGATCGTGAACAGTGGCGTCGTAGTCTTGCTGAGGCAGGGTTAACACTTGTTGATGGTAGCTTTGAGGAGGGTGCTACATTAAATAATAATACTGATGCTGTTTGGTATATTGCAGCGGGCCAGTGTTATTCCTGGGATGGTGCATTCCCTAAAACTGTAGCTGCTGGCTCAACACCTACATCATCTGGTGGAGTTGGATTGGGTGCGTGGGTTAGTGTTGGTGATGCTTCATTGAGAAAAGAACTATCATCTAACTATGGTGCTGGTCTTATTAAAACAACAAATGGCGACAGTGTTCAGTCAGAACTTGATACTTTGCGGTTATCTGATAGTGCTGAGAAAATTGCAGCCAACCTGTTATTAGGCTCCGCAAAAGTTATTGACTCCGTATCCAGTGCCGATTCTTTTATCCTCCCATCCTTCGCTACGTTAGAAGGGGGAGATAATTTCTTAACCGGCTTCATAGGAACAACCTACCAGAAAAACAAAACTATTCGTAAATCAAGTAATACAACTGTTACGTTAACAAACCAAGACCCAACCGCCAGTAGTCAAACCGTCGACGCTGTAGTATACCAGGATCCGTCCTGGCCTGGCGGCAGAGTATTCCCCCAAAAATCGGCATTAAAGCATATTACTGTTGAGGGTAACTCTGCTGCCAACCCCAGTCAGGCCGGATTTTTCGTATTACAAGCTGGAGTAGTTGACATTGAGAATGTAGATTTCATCAACTGCACCTATGCAATATGGGCTAAAGATATCTGGCAAAGCCGTATCTCCAGGGTATTCTCCAACAACGGAAAGATTCGTCTGGATAATGGTACGTCTGTGGTACTTACCGGGTGTGGACTTGCGTCAGCAGACACAGGGAGAACGGGCGCATTCGACCTTACGGGCATGAAGTATTCTACGCTTATTGGTTGTACATCAGACCATACTACCAATACTGCATATTCATTCGACGCTTGCGAAGGGATTGTGCTTGACGCTTGCGGATGTGAGGGCGCCAACACCACCACGGCTAATGCCGGAACAGCTCTGGCTTTTAAAGATAACAATCATAATATAGTGGTCAATGCTTTCACATGTTTTCCGGTAGCCGATCAGGGGCCAGCGCTAATATCGTTTGGCAGTAATAATCAGGTAACTCTAAACTCGTTCGAGGTTATACCAGGAATTACATATAACGGGGACATATACCTTTATGGAGCTAATTCCCATATCACTATAAATGGTGGGCGTTTCGGTTCATCCGGTAATGCTATGCCTATTGTTATTGCTTCAGCAGCCGCCGTTGGTTCTACGGTGACATACCATCATCGGCGCGGTATCACGTACACCTACAGAGTAACAGAGGCTGGGGTTGTATCTCCGGTACAACATTTCAGGCCTATTGTGTCTGCTATTATTGCTGCCTCTGGGGATGTTGTTTCAGGGTTTGGCGTTAACAGTGTAACTAAAAATAGTACTGGCTCTTACACTATTAACTTCACCAGTGAAGTAGCCACCGGATATCATATACAGCAGCTTTCGAGCTTCGGATTTCAGCAGGTAAGCACATTTGATAATACATCATTAACGGTTACACTCATAAGCCCAGATAAGATACCAACTGATTCTGCATTCTCAATAAATATAAATGGATGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
34159a458f74ea618d8cc1bf316d7f56a3e27f27151b4978c55c949f59e181b8
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7177
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Systematic exploration of Escherichia coli phage-host interactions with the BASEL phage collection Maffei,E., Shaidullina,A., Burkolter,M., Heyer,Y., Estermann,F., Druelle,V., Sauer,P., Willi,L., Michaelis,S., Hilbi,H., Thaler,D.S. and Harms,A. 2021 — GenBank