Protein

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Genbank accession
AGN33886.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MTALAQKNEKAPSFGTAINALRPDCEWIIYENDLTKFEWSDINTLPRPTDEEITNEYDKQVAVWTGNQYQRDRAPKYPAIEKQLDMLYHDIKEGNLNSGTWIAAIEAIKDADPKPAE
Physico‐chemical
properties
protein length:117 AA
molecular weight: 13399,77480 Da
isoelectric point:4,62814
aromaticity:0,09402
hydropathy:-0,79060

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-CAM8
[NCBI] 		754038 Uroviricota > Caudoviricetes > Pantevenvirales > Neritesvirus > Neritesvirus scam8
Host Synechococcus sp.
[NCBI] 		1131 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae
Host Synechococcus sp. WH 7803
[NCBI] 		32051 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGN33886.1 [NCBI]
Genbank nucleotide accession
HQ634178.1 [NCBI]
CDS location
range 37994 -> 38347
strand +
CDS
ATGACAGCATTAGCACAAAAAAACGAAAAGGCACCATCATTCGGGACTGCCATTAACGCACTCAGACCAGATTGTGAGTGGATCATCTATGAAAATGATTTGACAAAGTTTGAGTGGAGTGATATTAATACACTTCCTCGTCCTACTGATGAAGAAATTACTAATGAATATGATAAACAAGTAGCAGTTTGGACTGGAAACCAATATCAGCGTGATAGAGCACCTAAGTATCCTGCTATAGAAAAACAGTTGGATATGCTATACCATGATATTAAAGAAGGTAACTTAAACAGTGGCACATGGATTGCAGCGATTGAAGCAATTAAGGACGCAGATCCCAAACCTGCTGAATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
daccd4aabb7c04ff68131819b3a5c1a257f6f79dc61dfbe619684b73cb851aad
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,9156
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Synechococcus phage S-CAM8 0608BI06 Henn,M.R., Martiny,J., Weihe,C., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C., Larson,L., Mehta,T., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank