Protein

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Genbank accession
AFQ96033.1 [GenBank]
Protein name
tail fiber protein and host specificity
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,54
Protein sequence
MLLDNDKQGALNYYDDLWTRQLTTGSSAFEFSVYKKTLLGDNPLNHKYHALNDQAFVSFVHKGKVQLFNIMQVEETETKIRCLCENLNLELLNEYCNAYKATKAMSFEEYLVEFDILNCGALTIGTNEVKDKKLTLEWTGQDTKLARLLSIANNFDAEVEFETQLHNNHTFKAFIVNVYKEYEEGKSYGVGRDRSDTVLRYQKNIAGITKKLDKRQIYNAIRPYGKKTVKGERVVSNPVTRKVTKTVGSNRTYLGGDIKYYGHTIKKANVQAIINYAVQYNILPSGIITQLYLESFWGDSTVGRRDNNWSGMTGSAQTRPSGVKVTTGMARPANEGGTYMHYASVDDFLKDYTYLLAKQGIYNVVGKKNIADYTKGLFRAGGAKYDYAAAGYQSYTNLMSNIRNGINKVTGNILNTIDALWQTPVQPITSINVARRATKTIQALNEATSLKGRRIGSGQCYALSGWYAKKLDGAWIDSSIGGIRGRIGGGMAAALIGTDYNWGAYGWKLDRSPNASNLQAGGLYNVKANFGAPFYTTQWGHTGIIKSVSKTRVTVLEQNYAGRMYVMENSYEINAFARGLQTVCYPREIAQGMSVNGATTQQVSGGTQISYEEVVQEAQTESYEEEQIIYIDNSIYKEWKDENGKVEYYLKNGFLYAPLSRDRYPSVLTGNETRDNWIRKDMEVETDSQEVLMSTGLKDLKAHAYPAVTYEVNGYVDLELGDVVRIQDDGYEPPLILTARVIEQEISITNPSSNKTKFSNFVEKESQLASDLISDMLRLYDESIPYEIKLATSNGVAFKNGTGESVLNPSLQKNGKDYEAVYFYKNGDSLIDIGPSLIVKASDFNHVLNITVEAYLNEELVASTQISFTDTEDGEKGDDGKSSWTAWANSEDGKVDFSITESKNRRFIGTYTGIEQSTNYLDYKWTDMVGTVVVGTNNLIDGTKSFFGTDWFTSATLEDENLSNYPFTLKKWISGQKVSHAKDIMVEQGVTYTFSAYVKREVAGNLYFYLYDIADGFITSDTPRETTIKNVDSNVRRFEITFTPTKTGKIRPRFAMIASEQGSFSSGGFMLVRGNKTGDWQESEADKASNLDSKADGDFTVEQLNKLAERARIAEAELQSKATLDTVNDWVKALQDEIKAREGGQKLSEQKLIDFSNRMIAVQQTIGEMQIRTDFVNKFMSQSEDGLVIGQKDGTSSVRVDNDRISFYSSGKEVAYIAQSVLVIDSGIFTTKLQIGRYRIEQYELNADINVVRYVG
Physico‐chemical
properties
protein length:1256 AA
molecular weight: 140730,02440 Da
isoelectric point:5,60457
aromaticity:0,10669
hydropathy:-0,45836

Domains

Domains [InterPro]
DC_0558
ATT
1–387
DC_0558 IPR007921 G3DSA:2.60.120.260 Coil
IPR002901
ENZ
257–393
IPR002901 DC_0921
IPR002901
ENZ
271–386
IPR002901
G3DSA:3.90.1720.60
STR
363–585
G3DSA:3.90.1720.60
AFQ96033.1
1 1256
Architecture
ATT
STR
ATT 1-387 | STR 388-1256
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AFQ96033.1
1 1256
Domain Start End Length (AA) Confidence
N-terminal 1 248 248 0,9503
Central domain 249 449 202 0,6791
C-terminal 450 1256 806 0,0770
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-248
Central
249-449
C-terminal
450-1256

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage JX01
[NCBI] 		1225806 No lineage information
Host Streptococcus agalactiae
[NCBI] 		1311 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AFQ96033.1 [NCBI]
Genbank nucleotide accession
JX409895.1 [NCBI]
CDS location
range 24140 -> 27910
strand -
CDS
TTGCTTTTAGACAATGATAAACAAGGAGCACTTAATTATTATGATGATTTGTGGACTAGACAGCTCACAACTGGTTCGTCAGCCTTTGAGTTTTCAGTTTATAAAAAAACGCTGTTGGGTGACAATCCACTTAATCACAAATATCACGCACTAAACGATCAAGCATTTGTCTCTTTTGTACACAAAGGTAAAGTACAATTGTTTAACATCATGCAAGTCGAGGAAACAGAGACAAAAATACGTTGCCTTTGCGAAAATCTTAATTTAGAGTTACTCAACGAGTATTGCAACGCATATAAAGCAACTAAAGCGATGTCGTTTGAAGAGTATCTTGTAGAATTTGATATTTTAAACTGTGGTGCTTTGACAATTGGCACAAACGAAGTCAAGGACAAAAAACTCACTTTGGAATGGACTGGCCAAGATACTAAGTTAGCTCGCTTGTTATCGATTGCTAATAATTTTGATGCGGAAGTTGAGTTTGAGACGCAACTACACAATAACCACACATTTAAAGCTTTTATAGTAAACGTCTACAAAGAATATGAAGAAGGCAAGTCATACGGTGTTGGTCGTGACAGAAGTGACACTGTGCTTAGATACCAAAAAAATATCGCTGGTATTACTAAAAAGCTTGATAAGCGTCAGATTTACAACGCAATACGCCCTTACGGAAAAAAGACTGTAAAAGGTGAGCGGGTCGTCTCTAATCCTGTTACTCGTAAAGTCACTAAGACGGTCGGATCAAATCGCACTTATTTAGGTGGTGACATTAAATATTACGGTCACACAATCAAAAAAGCAAACGTACAAGCGATTATAAACTATGCTGTACAATACAACATTTTGCCAAGCGGAATCATCACGCAACTTTATTTAGAGAGCTTTTGGGGTGACTCAACTGTCGGTAGGCGTGATAACAACTGGTCAGGAATGACAGGTAGTGCGCAAACTAGACCAAGTGGAGTCAAGGTTACAACTGGTATGGCTCGTCCCGCAAACGAGGGCGGGACATACATGCACTATGCAAGTGTAGATGACTTTTTAAAAGACTACACTTATCTCTTAGCAAAACAAGGGATTTATAATGTCGTTGGCAAAAAGAATATAGCTGACTATACAAAAGGGCTTTTTAGGGCTGGTGGCGCTAAATATGACTACGCAGCAGCAGGATATCAAAGCTACACAAATTTGATGTCTAATATCCGAAATGGTATTAATAAAGTAACCGGGAATATCCTTAATACGATTGATGCATTGTGGCAAACGCCAGTACAGCCTATAACTTCCATAAACGTGGCTAGAAGAGCCACTAAGACAATACAAGCGCTAAATGAAGCTACTAGTCTCAAAGGGCGTAGAATTGGCTCAGGGCAATGTTACGCTTTATCTGGCTGGTACGCTAAGAAGTTAGACGGAGCTTGGATTGATAGCTCTATTGGTGGTATCCGTGGTCGGATTGGCGGTGGTATGGCTGCTGCTTTAATCGGTACTGATTACAATTGGGGTGCTTATGGTTGGAAGCTAGACAGGTCGCCTAATGCTAGCAACTTGCAAGCAGGCGGTCTTTACAACGTTAAAGCTAATTTTGGTGCTCCATTTTACACAACACAGTGGGGTCACACTGGAATTATCAAGAGCGTTTCCAAAACTAGAGTCACAGTTTTAGAACAAAATTACGCTGGTCGCATGTATGTCATGGAAAACTCATACGAGATTAACGCTTTTGCTAGAGGATTGCAGACAGTATGTTATCCCCGCGAGATTGCGCAAGGAATGTCTGTCAACGGTGCAACAACACAGCAAGTGAGTGGTGGGACACAGATATCATATGAGGAAGTTGTACAAGAAGCACAGACAGAATCATACGAAGAAGAGCAAATCATCTATATCGATAACTCTATCTACAAAGAATGGAAAGACGAAAACGGTAAAGTAGAATACTATCTCAAAAATGGATTTTTGTACGCACCACTTTCAAGAGACCGCTATCCATCTGTTTTAACCGGTAATGAGACACGAGACAACTGGATACGAAAAGACATGGAAGTCGAGACTGATAGTCAAGAAGTCTTGATGTCAACAGGTCTAAAAGACTTAAAAGCACACGCTTATCCAGCTGTCACTTATGAAGTCAATGGATATGTTGATTTAGAACTTGGTGATGTTGTGCGAATACAGGACGACGGATACGAGCCACCGCTAATTCTCACAGCGAGGGTTATTGAGCAAGAAATATCCATAACAAATCCCAGCTCTAACAAAACTAAATTCAGCAATTTTGTCGAAAAAGAAAGTCAGTTAGCTTCTGATTTAATCAGTGATATGTTGCGTCTATACGATGAGTCAATTCCATACGAAATCAAACTAGCTACTTCGAATGGTGTCGCTTTTAAAAATGGCACTGGTGAATCTGTCCTAAATCCTAGCTTGCAAAAGAACGGGAAAGACTATGAAGCAGTTTATTTTTATAAAAATGGTGACTCGCTAATTGATATCGGACCATCGCTAATCGTTAAAGCAAGCGACTTTAACCACGTTTTAAATATAACAGTTGAGGCATATTTAAATGAGGAACTTGTAGCAAGTACGCAAATATCCTTTACAGATACTGAAGATGGAGAAAAAGGCGATGATGGTAAGTCATCATGGACAGCGTGGGCTAATTCAGAAGATGGAAAAGTTGATTTTAGTATAACTGAGTCTAAAAATAGAAGATTTATTGGAACTTATACTGGTATAGAGCAATCAACAAACTATCTTGATTATAAGTGGACTGATATGGTCGGAACAGTCGTTGTTGGCACAAACAATCTGATTGATGGTACAAAATCATTTTTTGGGACTGATTGGTTTACTTCTGCGACATTAGAAGACGAGAACCTCTCTAATTATCCTTTCACGCTTAAAAAATGGATTAGTGGGCAAAAAGTGTCGCATGCAAAAGATATCATGGTCGAGCAAGGTGTAACATACACCTTTAGCGCTTATGTTAAACGTGAGGTAGCTGGGAATTTATATTTTTATCTTTATGATATAGCAGATGGTTTTATTACTAGTGATACACCTAGAGAAACAACAATAAAAAATGTTGACTCAAATGTCAGACGCTTTGAAATCACCTTTACACCTACGAAAACAGGTAAGATTAGACCACGCTTCGCAATGATCGCTAGCGAACAAGGTAGTTTTAGCTCTGGCGGATTTATGCTTGTTAGAGGAAATAAAACAGGCGACTGGCAGGAATCAGAAGCTGATAAAGCAAGTAATCTTGATTCGAAAGCTGACGGTGATTTTACTGTCGAGCAGTTAAACAAACTTGCCGAACGTGCTCGCATTGCAGAAGCTGAATTGCAATCTAAAGCAACGTTAGACACAGTCAACGACTGGGTTAAAGCATTGCAAGACGAAATCAAAGCACGAGAGGGAGGACAAAAGTTATCAGAACAAAAACTGATAGACTTTTCTAATCGCATGATAGCAGTACAGCAAACAATTGGGGAGATGCAGATACGCACTGATTTTGTTAATAAATTTATGAGTCAGTCAGAGGACGGTCTTGTAATCGGACAAAAAGATGGAACGTCAAGCGTTAGAGTTGATAACGATCGCATCAGTTTTTACTCAAGTGGTAAAGAAGTAGCATATATAGCTCAGAGTGTGCTTGTTATTGATAGCGGTATTTTTACAACTAAACTGCAAATTGGACGTTATCGTATTGAGCAATACGAACTAAACGCTGATATTAACGTCGTAAGATATGTCGGGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
13ea1b300ea8bb26d485ca37e868e0d38e2e5cc9be45f67d92d015f4c88227c4
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7663
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization and genome sequencing of a novel bacteriophage infecting Streptococcus agalactiae with high similarity to a phage from Streptococcus pyogenes Bai,Q., Zhang,W., Yang,Y., Tang,F., Nguyen,X., Liu,G. and Lu,C. 2013 23515875 GenBank