Protein

View in Explore
Genbank accession
BAF36186.1 [GenBank]
Protein name
lysozyme/metalloendopeptidase
RBP type
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MWNRENLQPLLNRPEFRALLDVISDGQFEGADYNTLYGGSKFNSYEDHPRQRFPIGGRGNYTTAAGRYQILDVTWDGINRETGGMLSDFSPLNQDLAILYLILDETGTTVEEVMSGNILSYYNKLRKQWTSLPGASEARGGENTLATLYKQYLAYRRGQGPAPSTLSGGGGNAPTIPGDSAYSTEQLAQALAEGIDGFVNAVFNRTGEFKWPYNQRDAITHTGSVPQVNRAMTNNTLSYGAGAPGFQFNEVSALAGQVIPGRPGSGSGIVPSKGSLTSGFGWRWGRMHNGIDIGAPIGTPILATMTGKVISVGFENNGFGNIVKLEHVGGNQSWYAHMSKFAVKLGDIVKQGQVIGEVGSTGRSTGPHLHFEWRVRSGIGGGLNAVDPRLSVLKGLI
Physico‐chemical
properties
protein length:397 AA
molecular weight: 42694,26990 Da
isoelectric point:7,88811
aromaticity:0,09572
hydropathy:-0,33300

Domains

Domains [InterPro]
IPR023346
STR
11–154
IPR023346 IPR050570
G3DSA:1.10.530.10
RBD
12–158
G3DSA:1.10.530.10 IPR011055
cd00736
STR
14–156
cd00736 IPR011055
IPR011055
RBD
259–389
IPR011055
IPR016047
ENZ
286–376
IPR016047
cd12797
ENZ
288–372
cd12797
BAF36186.1
1 397
Architecture
STR
RBD
STR 11-158 | RBD 245-392 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Microcystis phage LMM01
[NCBI] 		2856824 Uroviricota > Caudoviricetes > Fukuivirus >
Host Microcystis aeruginosa
[NCBI] 		1126 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
BAF36186.1 [NCBI]
Genbank nucleotide accession
AB231700 [NCBI]
CDS location
range 84752 -> 85945
strand +
CDS
ATGTGGAATAGAGAGAATCTACAACCTCTTCTGAATAGACCTGAGTTTAGGGCCCTCCTGGATGTAATCAGTGATGGACAATTTGAGGGGGCCGATTACAACACACTATACGGTGGATCTAAATTCAATAGTTACGAGGATCACCCCCGCCAGAGATTCCCAATAGGAGGTCGAGGGAACTACACCACGGCTGCAGGTAGATACCAGATCTTAGATGTGACATGGGATGGTATTAATAGAGAGACTGGGGGAATGCTATCTGACTTCAGCCCTCTGAACCAGGATCTAGCCATACTATATTTAATACTCGATGAGACTGGTACTACGGTAGAGGAGGTCATGAGTGGTAACATACTAAGCTACTATAACAAGCTACGGAAACAATGGACTAGTCTACCGGGGGCCTCAGAGGCACGAGGTGGAGAGAATACGCTAGCTACTCTATATAAACAGTATCTAGCCTATAGGCGAGGACAGGGCCCGGCACCATCTACTTTGAGTGGTGGTGGGGGTAATGCCCCTACTATACCGGGCGATAGTGCTTATTCTACTGAACAGTTGGCGCAGGCACTAGCAGAGGGTATAGATGGATTTGTTAATGCTGTATTCAACCGTACAGGAGAGTTCAAGTGGCCTTATAACCAACGCGATGCTATTACTCATACAGGTTCTGTACCTCAGGTTAATAGAGCTATGACTAATAATACTCTATCCTATGGAGCAGGGGCCCCCGGGTTTCAGTTCAATGAGGTAAGCGCATTAGCAGGTCAGGTAATACCCGGTAGGCCAGGCTCTGGGAGTGGCATAGTACCCTCTAAGGGATCTCTGACTAGTGGGTTTGGCTGGCGTTGGGGTAGGATGCACAACGGTATAGACATAGGGGCTCCGATAGGCACACCTATATTAGCCACTATGACAGGCAAGGTGATATCAGTCGGATTTGAGAATAATGGATTTGGTAATATAGTTAAACTAGAACACGTAGGGGGCAATCAGAGTTGGTACGCGCATATGAGCAAGTTTGCTGTTAAATTAGGAGATATAGTGAAGCAGGGACAGGTAATAGGCGAAGTAGGCAGTACTGGCCGTAGCACTGGCCCCCATCTTCACTTCGAGTGGAGAGTAAGATCTGGTATAGGTGGGGGTCTGAATGCGGTAGACCCGCGCCTTAGTGTATTAAAGGGATTAATATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
95120af84c7a744ffac538f4c3535a0971407899bd96bd3cdfa0c75626818d23
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7292
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Ma-LMM01 infecting toxic Microcystis aeruginosa illuminates diverse cyanophage genome strategies Yoshida,T., Nagasaki,K., Takashima,Y., Shirai,Y., Tomaru,Y., Takao,Y., Sakamoto,S., Hiroishi,S. and Ogata,H. 2008 18065537 GenBank