Protein

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Genbank accession
YP_010663643.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MTEHKITLSTTEPNSNIGIIKLRHADVNSQAIVAQIVENGQPKNFEGLQPYFCLMAQEVTGQGVSEESVVSFDAKNGTLKYVASDNALQMVGHNEAYFSFRKQEDGRWIEQFSTRTFHYIVEKSIYSQPFKDSNYWWTFKELNRIFNQYIEDGKTSWEEFVKSNREIIESIDPGGQVLSELIRSRKPEDAASAYPDLPTRLDKQIGKNTDFRSFESDKSFMTRVYNESAERGVNVKWFGAKGDGVTDDTVAIQSAIDTGFSVFIPPGKYNVKELKGFSSGQIIQGISKVESWGGKNTQNITLLNGIGSADNYVIKNNVWGDGILPNAITVKNLSIEGSKKTNGILVGNSSTIEGVKIANCINGLSNIKVSNVMNCQINGCTNGVMNATDSKITNNFFYFNEVGINFDNSNDNSIVNNKIEWNGIGISLTKATYNLISNNIIDRNTTYGIYTSNAVSTTISGNQFERNLTNHLYLHGSLFNISTNSFFRKNSEDNQSGIVAPDVAIFTKSIENSSITSNLVNGKMFNKTGTDYTSNLSIFANTIDGINPDNITVSIPETTAFHGKDTKIIIPLPNYFDGALNNPYNVEILSQKISFISQKGNFYSNGEIIKSIYMSASGIELTIFNGLSDDLKITGSINVRCSYRSIY
Physico‐chemical
properties
protein length:647 AA
molecular weight: 71694,21500 Da
isoelectric point:5,60679
aromaticity:0,10046
hydropathy:-0,35363

Domains

Domains [InterPro]
G3DSA:2.60.40.3350:FF:000001
Unmapped
1–126
G3DSA:2.60.40.3350:FF:000001 G3DSA:6.10.250.1350 IPR011050 DC_1144
G3DSA:2.60.40.3350
ATT
1–126
G3DSA:2.60.40.3350 IPR012334
G3DSA:2.60.40.3350
ATT
1–125
G3DSA:2.60.40.3350 G3DSA:6.10.250.1350 IPR012334
IPR018913
ATT
3–148
IPR018913 IPR024535 IPR006626 IPR039448
IPR006626
Unmapped
387–408
IPR006626 IPR006626 IPR006626
IPR022441
Unmapped
403–445
IPR022441
IPR022441
Unmapped
425–467
IPR022441
YP_010663643.1
1 647
Architecture
ATT
STR
RBD
ATT 1-192 | STR 229-562 | RBD 563-647
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010663643.1
1 647
Domain Start End Length (AA) Confidence
N-terminal 1 248 248 0,9954
Central domain 249 554 307 0,9928
C-terminal 555 647 92 0,9828
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-248
Central
249-554
C-terminal
555-647

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage CHPC577
[NCBI] 		1913081 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptococcus thermophilus
[NCBI] 		1308 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010663643.1 [NCBI]
Genbank nucleotide accession
NC_070901.1 [NCBI]
CDS location
range 15003 -> 16946
strand +
CDS
ATGACAGAACATAAGATAACTTTAAGTACCACAGAACCTAATAGCAATATTGGCATTATTAAGCTAAGACATGCGGATGTCAATAGTCAAGCAATTGTTGCTCAAATCGTAGAGAACGGTCAGCCCAAGAACTTTGAAGGCTTACAGCCTTACTTTTGTTTAATGGCACAAGAAGTCACAGGTCAAGGAGTGTCAGAAGAAAGTGTTGTCTCCTTTGATGCAAAAAATGGAACACTGAAATATGTTGCCAGTGATAATGCTTTGCAAATGGTTGGACATAATGAAGCTTATTTTAGCTTTAGAAAACAAGAAGACGGGCGGTGGATTGAGCAATTCTCTACTCGGACATTTCACTATATTGTTGAGAAATCTATTTACTCACAACCCTTTAAAGACTCGAATTACTGGTGGACATTCAAAGAGTTAAATCGAATCTTCAACCAATATATTGAAGATGGTAAAACTAGCTGGGAAGAATTTGTGAAATCCAACCGTGAAATTATTGAATCCATTGATCCAGGCGGCCAGGTTCTTAGCGAGTTGATAAGGTCAAGGAAACCGGAAGATGCTGCTTCGGCATATCCAGACCTGCCGACTAGGCTAGATAAACAAATCGGGAAAAATACTGATTTTAGGTCATTCGAATCGGATAAATCGTTCATGACTAGAGTTTATAACGAATCTGCTGAACGAGGAGTTAATGTCAAATGGTTTGGAGCTAAAGGAGACGGAGTAACTGATGATACTGTTGCGATACAAAGCGCTATTGATACAGGTTTTTCAGTTTTCATACCGCCCGGTAAGTATAATGTAAAAGAATTGAAAGGTTTTTCATCAGGACAAATCATACAAGGAATTAGTAAGGTTGAATCTTGGGGAGGAAAAAACACACAAAATATAACGCTACTTAATGGAATAGGTTCTGCAGACAACTATGTGATAAAGAATAACGTTTGGGGAGATGGTATTCTGCCCAACGCTATTACCGTAAAGAATTTATCCATAGAAGGTAGTAAGAAAACAAATGGAATACTTGTCGGAAACTCTAGTACTATTGAGGGAGTGAAAATCGCAAATTGTATTAATGGGCTATCTAACATCAAAGTGTCAAATGTTATGAATTGTCAAATTAACGGTTGTACTAACGGAGTAATGAATGCCACGGATTCAAAGATAACTAATAACTTTTTCTATTTTAATGAAGTCGGCATAAATTTTGATAATTCCAATGATAACAGTATTGTGAATAATAAAATAGAGTGGAATGGAATAGGAATATCCTTAACGAAAGCGACTTACAACTTAATTAGTAATAACATTATTGATAGAAACACTACTTATGGAATATATACGTCTAATGCGGTTAGTACAACTATTTCAGGTAATCAGTTTGAAAGAAATTTAACAAATCATCTTTACTTACATGGTTCTCTATTTAATATTTCTACAAATTCTTTTTTTAGAAAAAATTCGGAAGATAACCAATCAGGAATAGTCGCTCCTGATGTAGCTATTTTCACTAAGTCTATAGAAAATTCTTCAATAACAAGTAATCTTGTTAATGGTAAAATGTTCAACAAGACAGGTACAGACTATACCTCTAATCTTAGCATCTTTGCCAATACCATAGATGGAATAAATCCTGATAATATAACTGTATCCATTCCAGAAACAACTGCCTTTCATGGTAAAGATACAAAGATAATTATTCCTCTTCCAAATTATTTTGATGGTGCATTAAACAATCCATATAATGTAGAAATCCTCTCACAAAAAATATCGTTCATCTCACAAAAAGGGAACTTTTACTCAAACGGAGAAATCATAAAGAGCATTTATATGTCCGCAAGTGGTATTGAGTTAACAATTTTCAACGGATTAAGCGATGATTTGAAAATAACAGGGTCAATAAATGTAAGATGTTCATATCGAAGTATATATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
1af2c333eaeec11e3a6a4f1f99865b8dc227c245134d8c1d66d35d346dccd58a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7712
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50