Protein

View in Explore
Genbank accession
WGH49927.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MATKIIELPQITTTDNEDQILVYDSKTQALSRINADDLVASVGHGSVQSDWSELDASKPAFIKNKQVVSNSITALDTQVVDLGTKTTNLITALGDVKKDVADNKAEIDALETKSTGYDKDLKDLETKLTTTDTQATTALAKATACESKVASVERVQVRHEGEITTLTGKQGTIEGLLDDNTKAIVSLKASKVDGLTATVNDQAKTITLVLTSGSSTIDTDIIDLSSWFGVSPPTTDHEFFFGFSIRTVVDESNILNGQSATAPSINGYDVVSTRNSSNSSYMWIWIPDVFGAIKGFNFSGFLSVWAGTPVLVASIPGKLYVSPNTTTAKIIKYEVTQ
Physico‐chemical
properties
protein length:337 AA
molecular weight: 36114,01240 Da
isoelectric point:4,70413
aromaticity:0,06231
hydropathy:-0,12582

Domains

Domains [InterPro]
DC_0845
STR
2–336
DC_0845
G3DSA:1.10.287.1490
STR
64–223
G3DSA:1.10.287.1490
SSF57997
STR
88–178
SSF57997
Coil
Unmapped
93–127
Coil
WGH49927.1
1 337
Architecture
STR
STR 2-336 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudoalteromonas phage vB_PtuP_Slicky01
[NCBI] 		3038240 No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WGH49927.1 [NCBI]
Genbank nucleotide accession
OQ508958 [NCBI]
CDS location
range 19833 -> 20846
strand +
CDS
ATGGCAACTAAAATTATAGAGCTACCTCAGATAACTACAACAGACAACGAAGATCAGATCTTAGTATATGATTCAAAGACACAGGCGTTGTCTAGGATTAATGCTGATGATCTTGTGGCTTCTGTAGGACATGGTAGCGTACAATCAGATTGGTCGGAGCTAGATGCATCTAAGCCGGCATTCATAAAGAACAAACAAGTAGTATCTAATTCTATTACTGCATTAGATACTCAAGTAGTCGACCTAGGTACTAAGACAACTAACTTAATAACTGCCTTAGGGGATGTTAAGAAGGATGTAGCAGATAACAAAGCTGAGATAGATGCATTAGAAACTAAATCAACAGGTTACGATAAAGACCTAAAGGACCTAGAGACTAAGTTAACTACTACTGATACACAGGCAACCACTGCCTTAGCTAAAGCTACTGCCTGTGAATCTAAAGTAGCTAGTGTTGAGAGAGTTCAGGTTAGACATGAAGGTGAAATAACAACTCTTACAGGTAAGCAAGGGACTATAGAAGGTTTACTTGATGATAACACTAAGGCTATTGTAAGTCTTAAGGCCAGTAAGGTAGATGGTCTTACTGCTACTGTTAATGATCAAGCTAAGACTATTACATTGGTCTTAACGTCTGGGAGTAGCACAATAGATACAGATATCATAGACCTATCCAGCTGGTTTGGTGTTAGTCCTCCTACTACTGATCATGAGTTCTTCTTCGGGTTCTCAATACGAACAGTAGTTGATGAAAGTAATATCTTAAATGGACAGAGTGCAACTGCACCTTCGATTAATGGGTATGATGTAGTATCTACCCGTAATTCATCTAATAGCAGCTATATGTGGATATGGATACCTGATGTCTTTGGGGCTATTAAGGGCTTCAACTTCTCTGGTTTCTTATCAGTATGGGCAGGTACTCCTGTTTTAGTGGCTAGCATACCCGGTAAGTTATATGTTAGTCCTAATACTACAACAGCTAAAATAATTAAATATGAGGTGACACAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b3d33b6e59204760c6656eaa7698037736efdbdda3ccdd324a2e9af7a1dc3637
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6345
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Ecogenomics reveals distinctive viral-bacterial communities in the surface microlayer of a natural surface slick Rahlff,J., Wietz,M., Giebel,H.-A., Bayfield,O., Nilsson,E., Bergstrom,K., Kieft,K., Anantharaman,K., Ribas-Ribas,M., Schweitzer,H.D., Wurl,O., Hoetzinger,M., Antson,A. and Holmfeldt,K. 2023 — GenBank