Protein

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Genbank accession
AUR99213.1 [GenBank]
Protein name
coil containing protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MSDLDNAINSINASAAKAENTASFLDDMSTFDDQSSVTNPNNGQTVASIPKQVKDRTDELFTAAESDINQAVADAAQSATDAQDAADSIGRYQGLWPDTGGIADKGDTYQTQVSGTPTGQYFTALQNTTADPVSDDVNWREIVSVASLSDYGILKYATVSDMVSGNPTAASIGDRCSTGGTLWSRVSTSSGNISDFSPITEIYLSDYGDDLSSFIGANTEFVNLFTSGESDLSDTLGVSERGYFLEGQSYDTTIVNFNPSTIKPAFKFENGANGTERLLRTGLSNIAINGADIGNTATGNNAVWGNNLHFFTMDKVFATRFNITGEYAFRFTGGDFSTSQFGMLNRISNSIADGCAGGLRIGNTTSGQDGPVNASLIEHNRFTGLNDGSGVGINMRKGFANTFLCNDVELFDVAYSIGDNGNCIVGGDIESNGKAFLVESPNSSIYGESGFTEDYVLDFDVFGGVCSSLTDIWGDGLHFNIDRYKGLIRQRSIDTTSENLILNGDFENGSLGGGKWDTSRLSTDKSIQGDYSLKFTNATDPSGGFVFAPDRFMQNTWYTISCWVNVDDTVTNTPALRMRVGASDTGYKSGLSDIDGRALNLTGNAGTAPSNLPSNAMLADGKWRRYVFSFNSGTNTDFPSALEFYTPSGVTGGSFYVDCIKVEEGSVGTMFTRSPLDEKNINIGDGSNTTLDVFGGSHLGDATSGSYSVTLPDASITAAGTKWIISKISGSNRINLFPFSGQLINGSSGQYSPPFFDTLYNSISLECNGVDGWTVVAKVDNS
Physico‐chemical
properties
protein length:782 AA
molecular weight: 83188,76490 Da
isoelectric point:4,24465
aromaticity:0,10102
hydropathy:-0,28146

Domains

Domains [InterPro]
Coil
Unmapped
1–21
Coil G3DSA:2.60.120.260
DC_0090
STR
1–782
DC_0090
IPR008979
STR
497–664
IPR008979
PF13385
LEC
546–634
PF13385
AUR99213.1
1 782
Architecture
STR
STR 1-782
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR99213.1
1 782
Domain Start End Length (AA) Confidence
N-terminal 1 212 212 0,9932
Central domain 213 495 284 0,9911
C-terminal 496 782 286 0,8868
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-212
Central
213-495
C-terminal
496-782

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.263.A._10N.286.51.B1
[NCBI] 		1881272 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio cyclitrophicus
[NCBI] 		47951 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR99213.1 [NCBI]
Genbank nucleotide accession
MG592627 [NCBI]
CDS location
range 32279 -> 34627
strand +
CDS
ATGAGCGATTTAGACAACGCTATAAATTCAATTAACGCATCAGCAGCTAAGGCAGAAAATACCGCTAGCTTTCTGGATGATATGTCTACGTTTGACGATCAATCAAGCGTAACCAACCCAAACAACGGGCAAACTGTTGCGTCTATCCCTAAGCAGGTAAAAGATCGCACAGATGAGCTGTTTACCGCTGCTGAGTCGGATATCAATCAAGCAGTAGCTGACGCCGCACAAAGCGCAACAGATGCACAAGATGCTGCGGACAGCATTGGGCGCTATCAAGGGTTATGGCCAGACACAGGCGGCATTGCTGATAAAGGCGATACATACCAAACCCAAGTAAGCGGCACACCTACCGGTCAATACTTTACAGCATTGCAAAACACAACTGCCGATCCGGTTAGTGATGATGTTAACTGGCGTGAGATTGTTAGTGTGGCGAGTCTTTCTGATTACGGGATACTAAAATACGCTACTGTTTCTGATATGGTTTCAGGAAACCCCACCGCTGCAAGTATTGGTGATAGGTGTTCAACTGGTGGCACCTTATGGTCTAGAGTTTCAACGTCTAGTGGTAATATTTCGGACTTTTCGCCAATAACAGAAATATATCTATCGGATTATGGAGATGATCTTTCAAGCTTCATAGGTGCTAATACAGAGTTTGTAAATTTATTCACAAGTGGTGAAAGTGATTTAAGTGATACTTTAGGAGTGTCTGAGCGTGGGTACTTTTTAGAGGGTCAATCTTACGACACAACTATAGTTAACTTTAACCCATCAACTATTAAGCCAGCATTTAAGTTTGAAAATGGAGCTAACGGGACCGAAAGACTACTAAGGACTGGCTTATCTAATATAGCCATCAATGGGGCTGACATTGGAAACACTGCGACTGGTAACAATGCAGTATGGGGTAATAATCTTCACTTTTTTACCATGGATAAGGTGTTCGCCACTAGATTTAATATTACGGGAGAGTACGCCTTTAGGTTTACTGGAGGTGATTTTAGTACTTCTCAATTTGGCATGTTAAATCGCATCAGTAATTCTATAGCTGACGGATGCGCAGGGGGGCTTAGAATTGGCAACACTACTTCTGGTCAAGACGGGCCAGTTAATGCGTCACTTATTGAGCACAACCGCTTCACAGGATTGAATGATGGGTCTGGTGTTGGCATCAATATGCGTAAAGGTTTTGCTAATACCTTTCTGTGTAATGATGTGGAGCTTTTTGATGTAGCATACTCAATTGGCGATAATGGCAACTGTATTGTTGGTGGTGACATTGAGTCAAATGGCAAGGCTTTTCTAGTAGAATCACCGAACTCATCAATTTATGGTGAGTCAGGTTTTACTGAAGATTACGTCTTAGATTTTGATGTTTTTGGTGGTGTATGTAGCTCTCTCACTGATATTTGGGGGGATGGCCTTCATTTTAATATCGACCGCTACAAGGGGCTTATTCGTCAGCGAAGCATAGACACTACATCGGAAAACCTAATCCTAAACGGTGACTTTGAGAATGGGTCTCTAGGTGGTGGTAAGTGGGATACCTCAAGGCTCTCAACTGATAAATCAATACAAGGCGATTACAGTCTTAAGTTCACAAACGCAACTGACCCAAGTGGGGGTTTTGTATTTGCACCTGATAGGTTTATGCAGAACACTTGGTACACGATTTCATGTTGGGTTAACGTAGATGACACTGTAACTAACACTCCAGCGCTACGTATGCGTGTTGGTGCAAGTGATACAGGTTATAAATCAGGACTCTCAGACATTGATGGTCGCGCTTTAAATCTAACAGGCAATGCGGGGACTGCACCTTCCAACCTGCCAAGCAATGCTATGTTAGCAGATGGGAAATGGCGACGTTACGTATTCTCTTTTAACTCTGGCACAAATACGGATTTTCCTAGCGCCTTAGAATTTTACACTCCGTCAGGGGTGACAGGTGGCAGCTTTTATGTTGACTGTATCAAGGTGGAGGAAGGATCTGTTGGGACTATGTTTACGCGCTCTCCACTGGATGAGAAAAACATAAACATAGGAGATGGCTCTAATACCACGCTTGATGTGTTCGGCGGATCTCACTTAGGAGATGCCACGTCAGGGTCTTATTCTGTAACACTACCAGATGCTAGTATTACCGCAGCAGGAACCAAATGGATTATTAGTAAGATATCCGGCAGCAACCGTATAAACCTTTTCCCGTTTAGTGGACAACTTATTAATGGATCTTCAGGGCAATACTCGCCACCATTCTTTGACACGTTGTACAACTCTATAAGTCTTGAGTGCAATGGTGTTGATGGATGGACTGTGGTTGCTAAAGTTGACAACTCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
269df907007aaab771547cf47122db50d765df1a4fa85a9624b74a6cf95f44da
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7143
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank