Protein

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Genbank accession
ALF02004.1 [GenBank]
Protein name
tail fiber protein and host specificity
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MDFYITDRTFELKTIASTTANVEYPVLSASDVSTLETASRRMTLQLAFTKDNTAKIKKDVAVGNYVLYQDLNQKFVWMTILKVTHNPLTQIRTLECEDAGMDLLNEDLPPFPSQGNHNIAWYIEKFTYDSGFVIGKNEIPNLTRTLEWDSNMTALERIQSVATQFDNAELEFSFEFVGNQLAKRKIDIYNKRGVDERKKLYVNKDINSIETEEDIYQLVNSIYPTGGTPEGKDEPINLKGYNWTDPEGRFRLDKTTGRINDTQNVKQWSRTNTNSHYFLQHKSWTTTNQKELVNTTVNWLKKYSVPVVNYIVDIANIPSQLTVGDTVDIIDENENLFLSSRVQKLTVNYETEQVVCELSDFVRLESGISDRLQELANDLKNDLNSKIPYEIFIEASSPLFIGGKTQDGNTTITLSAKVKWAGKDVTNIFNETDFTWSRYKSDGALDNTFTATGRSISVTSGNESQFKYEVALSY
Physico‐chemical
properties
protein length:474 AA
molecular weight: 54078,76600 Da
isoelectric point:4,91938
aromaticity:0,10338
hydropathy:-0,51350

Domains

Domains [InterPro]
DC_0266
STR
1–472
DC_0266
IPR007119
Unmapped
36–353
IPR007119
IPR010572
ENZ
131–361
IPR010572
ALF02004.1
1 474
Architecture
STR
STR 1-472 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Enterococcus phage IME-EFm5
[NCBI] 		1718158 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Enterococcus faecium
[NCBI] 		1352 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ALF02004.1 [NCBI]
Genbank nucleotide accession
KT588072.1 [NCBI]
CDS location
range 17803 -> 19227
strand -
CDS
TTGGATTTTTATATAACAGATAGAACCTTTGAATTAAAAACAATTGCTTCAACAACCGCTAATGTAGAGTACCCTGTGTTAAGCGCAAGTGATGTAAGTACATTAGAAACTGCTTCACGTAGAATGACCCTACAGTTAGCGTTTACAAAAGACAACACTGCTAAAATAAAAAAAGATGTAGCAGTTGGGAATTATGTACTTTATCAAGATTTGAATCAAAAGTTTGTTTGGATGACAATACTCAAAGTCACACATAATCCGCTAACTCAAATACGCACACTAGAATGTGAAGACGCTGGAATGGACTTATTAAATGAGGACTTACCGCCGTTTCCATCACAAGGGAATCATAATATAGCTTGGTATATTGAGAAATTTACCTACGATTCTGGTTTCGTTATTGGTAAAAATGAAATACCTAACTTGACACGTACACTAGAATGGGATAGCAATATGACTGCGTTAGAGCGTATTCAATCAGTAGCCACTCAGTTTGATAATGCAGAACTAGAGTTTTCATTTGAATTTGTTGGAAACCAGTTAGCTAAGCGTAAAATAGATATCTATAATAAGCGTGGAGTTGATGAGCGTAAAAAATTATATGTAAATAAAGACATTAATTCTATAGAAACAGAAGAAGACATTTATCAATTAGTAAACTCTATTTATCCAACTGGAGGAACTCCAGAAGGTAAAGATGAGCCAATCAATTTGAAAGGTTATAATTGGACAGACCCTGAAGGACGTTTCAGACTAGATAAAACCACTGGTAGAATAAATGACACGCAAAATGTAAAACAATGGAGTAGAACAAACACCAACTCCCATTATTTTCTACAGCATAAGAGTTGGACAACCACAAATCAGAAAGAGTTGGTTAATACAACGGTTAACTGGCTGAAAAAATACAGTGTGCCTGTAGTTAACTACATTGTAGATATTGCTAACATTCCATCACAATTAACAGTAGGTGACACTGTAGATATCATAGATGAAAATGAAAATCTATTTTTATCTAGTAGAGTACAGAAATTAACGGTTAATTATGAAACAGAACAAGTGGTATGTGAGTTATCTGATTTTGTTAGATTAGAAAGTGGTATCTCTGACCGTTTACAAGAGTTAGCAAATGATTTGAAAAATGACCTCAATTCTAAGATACCTTATGAGATATTTATTGAAGCCTCTTCACCGTTGTTTATTGGAGGTAAAACACAAGATGGAAACACCACAATCACACTTAGTGCCAAAGTGAAGTGGGCTGGAAAAGATGTAACAAACATTTTTAACGAAACTGATTTCACATGGTCTAGGTACAAGTCAGATGGAGCATTAGACAATACATTTACAGCTACAGGGAGATCAATATCAGTTACCTCTGGTAACGAGTCACAATTTAAATATGAGGTAGCATTAAGCTATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
94dd333b80350a1c67e876d715e35d0bdf66ad0db6867438b40a490b24a4f40f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8781
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence analysis of novel bacteriophage IME-EFm5 Gong,P., Han,W. and Gu,J. 2016-05 — GenBank