Protein

View in Explore
Genbank accession
WIC39617.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MADAPAGSTIQLSDGSVSEKLTVDKDITLQGTTEEGKSTILEQGITLASNNEPISVTVKNMTLQNGSFGLHDNNNGLEANGTRNAYLTFEDCVIKDFTGKGVYTADARVFKMKNCKIENCATGTDTGIAGDYAVDLNLIGVKSAVVELENCEFVGYCGAKAAFKVTQRGGPSDEGAGDIPMDKGQSYINNVTITGCSFDTDTPVDVRLGTEHKTPDQPDLENTTANFPVMISGNKTEINVHVAPTGKSYVVPVGGTGYKNGTGEFTVIGGTTPEPDPDPEEPTTGASIGDVDYATIPEAVAALKDGDTLVFNQDYDQPIIIDGVDVTINLNGHTIANTAPVYDPAGGIISLIAIENGANVTITGNGTIHALADDCYCVDVQNGSMLTIEDGTFIGNITACYVQQGDLVIEGGDYSIQQLSEPGNGGDERFTLNCLDSAYKDGTATIEVSGGTFNKFDPANNLAEGPGTNFCAAGYTTEQKGDKYTVIKA
Physico‐chemical
properties
protein length:489 AA
molecular weight: 51170,85700 Da
isoelectric point:4,17428
aromaticity:0,06339
hydropathy:-0,25603

Domains

Domains [InterPro]
IPR011050
STR
4–198
IPR011050 DC_2107
IPR011050
STR
292–406
IPR011050
WIC39617.1
1 489
Architecture
STR
STR
STR 4-198 | STR 290-489
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WIC39617.1
1 489
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,1107
Central domain 11 478 469 0,9960
C-terminal 479 489 10 0,3316
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-478
C-terminal
479-489

Taxonomy

  Name Taxonomy ID Lineage
Phage Phage Phass-1
[NCBI] 		3043662 Uroviricota > Caudoviricetes > Caudoviricetes code 15 clade >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WIC39617.1 [NCBI]
Genbank nucleotide accession
OQ749652.1 [NCBI]
CDS location
range 44481 -> 45950
strand +
CDS
TTGGCTGACGCCCCCGCTGGTTCCACCATCCAATTAAGTGATGGCTCCGTCAGCGAAAAACTCACAGTTGATAAGGACATTACCCTCCAAGGTACTACCGAGGAGGGTAAGTCCACTATCCTTGAGCAGGGGATTACGTTGGCTTCTAACAACGAGCCAATTTCTGTAACTGTAAAGAACATGACTTTACAGAACGGAAGTTTTGGCTTGCATGACAACAACAATGGACTCGAGGCAAACGGCACACGTAATGCTTATCTGACCTTCGAGGACTGTGTGATTAAGGACTTCACTGGCAAGGGTGTCTATACTGCTGATGCTCGTGTCTTCAAGATGAAGAACTGTAAGATTGAAAATTGCGCAACTGGCACTGATACTGGTATTGCTGGCGACTATGCAGTTGACCTCAATCTGATTGGTGTAAAGAGCGCAGTTGTTGAGCTTGAAAACTGTGAATTTGTTGGATACTGCGGCGCTAAGGCTGCCTTTAAGGTAACTCAGCGTGGTGGTCCTTCCGATGAAGGCGCAGGCGACATCCCAATGGATAAAGGCCAATCTTACATCAACAATGTAACTATTACTGGCTGCTCTTTCGATACTGATACACCTGTTGACGTTCGTCTGGGCACCGAGCACAAGACTCCAGATCAGCCTGATTTGGAAAATACCACAGCTAACTTCCCAGTTATGATTTCCGGCAATAAGACTGAAATCAACGTTCATGTTGCTCCTACCGGCAAGAGCTATGTTGTTCCTGTCGGCGGCACTGGCTACAAGAACGGCACTGGTGAGTTTACTGTTATTGGCGGCACAACTCCCGAGCCTGATCCTGATCCCGAAGAGCCTACAACTGGCGCTTCTATCGGTGATGTAGACTATGCTACAATCCCCGAAGCCGTTGCAGCTCTGAAGGATGGCGATACTCTTGTATTCAATCAGGATTATGACCAGCCAATCATCATTGATGGCGTAGATGTGACTATCAATCTGAATGGCCACACCATTGCTAACACTGCTCCGGTCTATGACCCAGCAGGCGGCATCATCAGTCTGATTGCTATTGAGAATGGCGCCAATGTGACTATCACTGGCAATGGCACAATTCATGCTTTAGCAGATGACTGCTATTGCGTTGATGTTCAGAATGGCTCTATGCTGACAATCGAGGATGGCACCTTCATTGGTAACATCACTGCTTGTTATGTCCAGCAGGGCGATCTCGTCATCGAAGGCGGCGATTACTCTATTCAGCAGTTGTCTGAGCCTGGCAATGGCGGCGATGAGCGCTTCACTCTGAACTGTCTCGATAGCGCTTACAAAGATGGTACTGCTACCATTGAAGTGAGCGGCGGTACTTTCAACAAGTTTGATCCTGCAAATAACCTCGCCGAGGGCCCAGGAACAAACTTCTGCGCTGCTGGTTATACCACAGAGCAGAAAGGCGATAAGTACACTGTCATAAAGGCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0333a102628124c95c67ba070bb22fac10e2d40cfb593863a0ba4f7c8ef11134
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8037
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Bacteriophage Phass-1 Discovered in the Human Gut Virome - the Founding Member of the Proposed New Family Phassviridae Tikunov,A.Y., Morozova,V.V., Chechushkov,A.V. and Tikunova,N.V. 2019-08-01 — GenBank