Protein

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Genbank accession
XKC23870.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MAIYSIPLVNGTTVVSTSLPEDRDLPYHQLGLTFTSAPLSGRMTVEYQMEGDPTWLKIPEANQLKLVETSTATFYARAVSYRFTISDVSGGSGLKVVLKNMKEWPGDLNPSGLYVGLRAVTQQNYTEANVKNGVQYEASSLVSALAAGSSSNVVFTTGNFPIVVKARQVTFNGTSLRANVYRSPVFTGGTPAPYFNLNDINPVTGGVTILVGATITNPGVEFGAPTYMLGSTGGVGQSVVSTFTVTGQERVLRPNTTYVLQLTNTSAEAQDIVSYLSWYEGGTDLPRNN
Physico‐chemical
properties
protein length:289 AA
molecular weight: 30920,40020 Da
isoelectric point:5,49601
aromaticity:0,09343
hydropathy:-0,05467

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage JB8
[NCBI] 		3374763 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas sp.
[NCBI] 		306 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XKC23870.1 [NCBI]
Genbank nucleotide accession
PQ473534.1 [NCBI]
CDS location
range 13535 -> 14404
strand +
CDS
ATGGCGATCTACTCGATCCCTCTTGTTAATGGAACCACGGTGGTCTCTACTTCTCTACCTGAGGATAGAGACCTTCCGTATCATCAGTTGGGGTTGACATTCACGTCAGCCCCGTTATCTGGACGGATGACTGTAGAATACCAGATGGAGGGTGATCCCACCTGGTTGAAGATTCCAGAAGCAAACCAACTCAAGCTTGTAGAGACTTCAACAGCGACTTTTTATGCTAGAGCAGTTTCATACAGATTCACCATAAGTGATGTTTCTGGTGGTTCAGGACTGAAAGTCGTTCTCAAAAACATGAAGGAGTGGCCTGGAGATTTAAACCCTTCTGGGTTGTATGTTGGACTTAGGGCTGTAACTCAGCAGAACTATACCGAGGCAAATGTTAAAAACGGTGTTCAATACGAAGCCTCCTCCCTTGTGTCTGCTCTTGCTGCTGGCTCATCTAGTAACGTAGTTTTCACTACGGGTAATTTTCCTATCGTTGTTAAGGCGAGACAAGTAACATTCAATGGTACTAGTCTAAGAGCTAACGTATACAGAAGCCCGGTGTTTACAGGAGGCACCCCAGCTCCTTATTTCAACCTCAATGATATCAATCCAGTCACTGGCGGTGTTACAATATTAGTAGGAGCTACAATAACTAACCCAGGTGTCGAATTTGGCGCCCCCACATACATGCTAGGAAGCACTGGCGGGGTAGGGCAATCTGTTGTTAGTACCTTTACTGTAACCGGACAAGAAAGGGTTCTTAGGCCCAACACAACCTACGTGCTTCAACTTACAAACACCTCAGCGGAAGCTCAAGACATTGTTTCCTACTTGTCTTGGTATGAGGGTGGGACGGATCTTCCGAGGAATAACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0f907e9bf1b910436cd5b2001d1fe041aaf4a8122b98149c597de5e0bef6d84f
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8236
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Discovery and characterization of a novel Pseudomonas phage of a new genus Nicholls,P., Clark,J.R. and Maresso,A. — — GenBank