Protein

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Genbank accession
XYR96010.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,77
Protein sequence
MSTLRVYNIENPSTAAGGIGIATDGSVTVGGLQYPTAGPLSNRNLIINGAMQVAQRGTGDTGVTAGPSWAADRFRLNVNTCGTWTTANTTSNLPSGFSNSIKVDCTTAKASLTGTDNCFLSQYVEAQNLVHLDYGSSTAKQITLSFWVKSNKTGDYVVELDHGDAATFNGIKYTINSANTWEYKTLTYVGDTSNAINNDNGVGLYVQWCLAAGPTLSSGTFQSNTWQTTTANRFAGQTNLADSTDNEWSITGIQLEVGERATPFEHRSYGDELASCQRYFYTHLGTDSTADGIGAGAVWQSNQIYVAIHHPVTMRSTPVFSNNISASTPGFIRMFAAGVASWNQTGSTFGTQRCGTNCSIVYLSDFYSNSNGTGGSVVTYTAGDAGWLEVFNDDLRMDFDAEL
Physico‐chemical
properties
protein length:403 AA
molecular weight: 43061,69010 Da
isoelectric point:4,75381
aromaticity:0,10422
hydropathy:-0,25285

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XYR96010.1
1 403
Domain Start End Length (AA) Confidence
N-terminal 1 268 268 0,0888
Central domain 269 392 125 0,0009
C-terminal 393 403 10 0,9982
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-268
Central
269-392
C-terminal
393-403

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage RB11-B
[NCBI] 		3412546 Viruses >
Host Synechococcus sp. MW02
[NCBI] 		1620844 Cyanobacteriota > Cyanophyceae > Synechococcales > Synechococcaceae > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYR96010.1 [NCBI]
Genbank nucleotide accession
PV261925.1 [NCBI]
CDS location
range 179799 -> 181010
strand -
CDS
ATGAGCACCTTAAGAGTTTACAATATAGAAAACCCTTCCACCGCAGCAGGTGGTATTGGTATTGCAACTGATGGTTCAGTGACTGTTGGTGGTCTTCAATATCCTACTGCTGGTCCATTAAGTAATCGCAACCTGATTATCAATGGCGCGATGCAGGTGGCTCAACGGGGCACAGGAGACACTGGAGTGACTGCTGGTCCGTCTTGGGCAGCTGATAGGTTTAGGTTAAACGTAAATACCTGTGGTACTTGGACAACAGCAAATACTACATCAAATTTGCCTTCTGGATTTTCAAATAGTATTAAAGTTGATTGTACTACTGCAAAAGCATCTTTAACAGGTACAGATAATTGCTTCCTTAGTCAATATGTTGAAGCTCAAAATTTAGTACATCTTGACTATGGTAGTTCTACCGCAAAACAAATTACACTCTCATTCTGGGTTAAATCAAATAAAACTGGTGATTATGTGGTTGAACTAGATCATGGAGATGCTGCTACTTTTAATGGCATTAAATATACAATTAATTCAGCAAACACCTGGGAATATAAAACTTTAACTTATGTTGGAGACACTTCAAACGCTATTAATAACGACAATGGTGTAGGTCTATATGTCCAATGGTGTCTTGCTGCTGGACCAACCCTTTCAAGTGGAACATTTCAATCAAATACATGGCAAACAACTACCGCAAATCGTTTTGCTGGACAAACAAATTTAGCAGATAGCACTGACAACGAGTGGTCAATTACTGGTATTCAATTAGAAGTCGGCGAAAGAGCCACGCCATTCGAACATCGTTCTTATGGTGATGAACTGGCCAGCTGTCAGAGGTATTTTTATACCCATTTGGGTACTGACTCTACTGCTGACGGAATCGGAGCTGGAGCAGTTTGGCAAAGTAACCAGATATATGTTGCCATTCATCATCCAGTAACGATGAGATCAACACCCGTCTTTAGTAATAATATATCTGCATCAACACCTGGATTTATCCGTATGTTTGCTGCTGGAGTGGCTAGTTGGAACCAAACTGGTTCTACTTTTGGTACACAAAGATGCGGAACAAATTGCTCTATAGTTTACTTGTCGGATTTTTATAGCAATTCAAATGGCACTGGAGGTAGTGTTGTTACATATACTGCAGGAGATGCAGGATGGCTCGAAGTATTCAATGATGACTTAAGAATGGATTTTGATGCAGAATTATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
a86741cef72fe7cdab438845df947ff9c6cd6e8bf4d25643e5334892629ca0fe
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,9245
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50