Protein

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Genbank accession
QQV87848.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MLEYGSSSIKDIIDNTPELAYNLEFTIGNGGNFTNILDALNYCKRYINYPNYAITLKLLNNLTINYTINIAKTDFRNLIIDGNGFTISKYCNSQLDTVFYGDMSIYPVIKNLTVENTNNRSFGVAFANYHGSIFASHAIVENNLTIKNFYNGIRHACSYLFTPGLTLDNCEYGLYAFRKSDTCLDAYVNIKNCGTGIAVYNGSEVVAQGVTFAGNTTDCNISYNTPTTNGTIWK
Physico‐chemical
properties
protein length:234 AA
molecular weight: 26038,94730 Da
isoelectric point:5,55353
aromaticity:0,13248
hydropathy:-0,10726

Domains

Domains [InterPro]
DC_0378
STR
2–234
DC_0378
IPR011050
STR
25–230
IPR011050
QQV87848.1
1 234
Architecture
STR
STR 2-234
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QQV87848.1
1 234
Domain Start End Length (AA) Confidence
N-terminal 1 32 32 0,5488
Central domain 33 223 192 0,9895
C-terminal 224 234 10 0,2988
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-32
Central
33-223
C-terminal
224-234

Taxonomy

  Name Taxonomy ID Lineage
Phage Campylobacter phage CJLB-7
[NCBI] 		2781360 No lineage information
Host Campylobacter jejuni
[NCBI] 		197 cellular organisms > Bacteria > Pseudomonadati > Campylobacterota > Epsilonproteobacteria > Campylobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QQV87848.1 [NCBI]
Genbank nucleotide accession
MW057933.1 [NCBI]
CDS location
range 42405 -> 43109
strand +
CDS
ATGCTAGAATATGGTAGTTCCAGTATAAAAGATATTATAGATAATACTCCTGAACTTGCTTATAACTTGGAGTTCACTATAGGTAATGGTGGAAATTTTACAAACATACTAGACGCACTTAATTACTGTAAAAGATATATTAATTATCCTAATTATGCAATAACTTTAAAATTATTAAATAATCTTACTATTAATTATACTATTAACATTGCAAAGACAGATTTTAGAAATTTAATAATTGATGGGAATGGATTTACAATATCAAAATATTGCAATTCACAACTTGATACTGTATTTTATGGTGATATGTCTATTTACCCTGTAATTAAAAATCTAACTGTTGAAAATACAAATAACAGGAGTTTTGGTGTAGCATTTGCTAATTATCATGGATCCATATTTGCATCACATGCAATTGTAGAAAATAACTTAACTATAAAGAATTTTTATAATGGTATTAGACATGCATGTTCATATTTATTTACCCCAGGATTAACTTTAGATAATTGTGAATATGGATTATATGCATTTAGGAAATCAGATACTTGTTTAGATGCCTATGTAAATATTAAAAATTGTGGAACTGGCATAGCTGTTTATAATGGTTCAGAAGTTGTAGCACAAGGTGTTACTTTTGCTGGCAATACTACAGATTGTAATATAAGTTATAATACACCAACTACAAATGGAACTATTTGGAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c2c2485a16ec847b1cbddf8a2258e0f70788f98390bb6ee12b5463f284c5ada0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8151
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Bacteriophages are an effective tool to reduce Campylobacter contamination in foods Vikram,A., Woolston,J. and Sulakvelidze,A. 2017-11-23 — GenBank