Protein

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Genbank accession
XHG74374.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,96
Protein sequence
MSSGCGDVLSLADLQTAKKHQIFEAEVITGKSGGVAGGASIDYATNTVTGQTQKTLPAILRDLGFESTSFDFTTGGTLTAADRNKVVFDPVSSTWYSWAGALPKVIPAGTNPLLDANWSPQTDPDLRADLASTTINKGASLIGTTSGDTVQTEIDKIKLKFNSFSSLRSSEGSLIGDYALLTGWHASYQGYGAGVFKCVDKTGLTDDGGTIAVGSTYAWKRITGPGDATEFGVVPNAGSTFDNKAYILSAAATGALIFPAGDIYTTFFTLTDTYLVRGNSTNIREIEAPNVTDFIVHCSRNGTWEGRIDGIVWEDVSIFPIDTHRGFHTYFTTLGNMRSVRVKGGIGSWIEGSSDWSFFQCEFVESKGRENILITPKVDEQGTIGGGLVFNKCFIARSAKDGASITQMPSVWFRDSVIYHNADTGLRFSTDRTTYPGPEFTVNKVTGCDIDDNYYAGVQIVGGRYVDFSNNWVSSGRQSSGPGLSIDDSIGINIESNSVYLCGQNGITVKNSSFGSVSNNNSNDNKNTGIRIINCNRISVCGNIACGETPLGAFPKPQEEGIRIEGDRISSYGNICTGNSINNYSNVATNKQDGLNITT
Physico‐chemical
properties
protein length:599 AA
molecular weight: 64016,22710 Da
isoelectric point:5,00595
aromaticity:0,09516
hydropathy:-0,22137

Domains

Domains [InterPro]
DC_1596
STR
1–355
DC_1596 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626
G3DSA:2.10.10.80
ATT
66–133
G3DSA:2.10.10.80 IPR012334
IPR040775
RBD
77–112
IPR040775 IPR011050
IPR039448
ENZ
444–582
IPR039448
DC_2234
RBD
446–599
DC_2234
XHG74374.1
1 599
Architecture
STR
ATT
STR
STR 1-65 | ATT 66-133 | STR 134-599
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XHG74374.1
1 599
Domain Start End Length (AA) Confidence
N-terminal 1 242 242 0,9929
Central domain 243 588 347 0,9960
C-terminal 589 599 10 0,2369
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-242
Central
243-588
C-terminal
589-599

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage vB_CECAV_044
[NCBI] 		3317294 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica subsp. enterica serovar Infantis
[NCBI] 		595 Pseudomonadota > Gammaproteobacteria > Enterobacterales > Enterobacteriaceae > Salmonella > Salmonella enterica

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XHG74374.1 [NCBI]
Genbank nucleotide accession
PQ220373.1 [NCBI]
CDS location
range 39632 -> 41431
strand +
CDS
ATGTCAAGCGGATGCGGTGATGTTTTAAGTCTGGCGGATTTACAGACCGCCAAGAAGCACCAGATTTTTGAGGCCGAAGTTATCACAGGAAAATCAGGTGGTGTAGCTGGGGGCGCGAGTATTGATTACGCGACAAACACTGTTACGGGACAAACCCAAAAGACATTGCCGGCTATACTGCGCGATTTGGGTTTTGAATCAACATCTTTTGACTTTACCACTGGGGGGACATTAACAGCAGCCGACCGTAACAAAGTGGTGTTTGACCCTGTAAGTTCGACCTGGTATTCGTGGGCTGGTGCGCTGCCGAAGGTTATCCCGGCTGGAACAAATCCGCTGCTTGATGCTAACTGGAGTCCCCAAACAGACCCAGATTTGAGGGCAGACCTGGCGAGCACCACAATTAACAAAGGCGCATCTTTAATTGGTACTACATCCGGCGATACAGTACAAACAGAAATTGATAAAATTAAATTGAAATTTAATTCATTTTCAAGCTTAAGAAGCTCGGAAGGTTCTCTTATCGGCGACTACGCGCTACTTACCGGATGGCACGCTTCCTATCAGGGGTATGGCGCCGGCGTATTTAAATGTGTAGATAAAACAGGGTTAACTGACGATGGTGGCACTATTGCGGTTGGCTCTACGTATGCGTGGAAACGTATCACGGGTCCGGGTGATGCTACTGAATTTGGTGTTGTGCCGAACGCCGGGAGTACGTTTGATAATAAAGCGTATATTTTATCAGCTGCGGCTACGGGGGCGCTTATCTTTCCGGCTGGTGATATTTATACAACATTCTTTACCCTTACTGATACCTACCTTGTGAGAGGGAACTCAACCAATATTCGCGAAATTGAAGCGCCAAATGTAACAGACTTTATTGTCCACTGCTCCAGAAACGGGACATGGGAAGGGCGAATTGACGGAATTGTATGGGAGGATGTTTCTATATTCCCTATTGATACGCATAGAGGTTTCCATACCTATTTTACTACCCTTGGTAATATGCGTAGTGTTAGAGTTAAAGGTGGTATTGGATCCTGGATTGAGGGATCTTCTGATTGGTCATTTTTTCAATGTGAATTTGTTGAGTCAAAGGGAAGAGAAAATATTTTAATAACACCAAAAGTAGATGAGCAGGGGACTATAGGCGGCGGACTGGTATTCAACAAATGCTTCATCGCCAGAAGTGCTAAAGATGGTGCCAGTATAACTCAAATGCCATCTGTTTGGTTCAGAGATTCTGTTATTTATCATAACGCCGACACGGGCCTCCGCTTCAGCACAGATCGTACAACATATCCAGGACCTGAATTTACTGTTAACAAAGTTACTGGTTGTGACATAGATGATAATTACTATGCGGGGGTACAGATAGTTGGTGGGCGTTACGTTGATTTCTCAAATAACTGGGTAAGTTCTGGTCGTCAATCTTCTGGGCCGGGATTAAGTATTGATGATAGTATAGGTATCAATATTGAAAGCAACAGCGTTTACCTTTGCGGACAAAACGGGATAACCGTAAAAAATAGTAGTTTTGGAAGTGTTAGTAATAATAACTCTAATGACAATAAAAATACTGGAATCCGCATTATTAACTGCAACCGCATTTCTGTCTGCGGTAATATAGCATGTGGCGAAACCCCATTAGGAGCCTTTCCAAAACCACAGGAAGAGGGTATCCGTATCGAAGGGGATAGAATTTCTTCTTACGGCAATATCTGCACCGGCAATTCAATTAACAACTACTCCAATGTAGCGACAAACAAGCAGGACGGGTTGAATATCACCACTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
f877454540718a6d50df8d76059176246577ed648250042cc8a6bec83c52107c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8692
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50