Protein

View in Explore
Genbank accession
WDQ44150.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MALNFTTITENNVIRDLTTQVNNIGEELTKERNIFDITDDLVYNFNKSQKIKLTDDKGLTKSYGNITALRDIKEPGYYYIGARTLATLLDRPDMESLDVVLHVVPLDTSSKVVQHLYTLSTNNNQIKMLYRFVSGNSSSEWQFIQGLPSNKNAVISGTNILDIASPGVYFVMGMTGGMPSGVSSGFLDLSVDANDNRLARLTDAETGKEYTSIKKPTGTYTVWKKEFEPKDMEKYLLSSIREDGSASFPLLVYTSDSKTFQQAVIDHIDRTGQTTFTFYVQGGVTGSPMSNSCRGLFMSDTPNTSSLHGVYNAVGTDGRNVTGSVVGSSWTFPKTSPSHKELWTGAQSFLSTGTTKNLADDISNYSYVEVYTKHKTSEKTKGNDDTGTICHKFYLDGSGTYVCSGTFVSGDRTDTKPPITEFYRVGVSFKGSTWTLVDSAVQNSKTQYVTRIIGINMP
Physico‐chemical
properties
protein length:458 AA
molecular weight: 50482,88940 Da
isoelectric point:6,02223
aromaticity:0,09825
hydropathy:-0,38450

Domains

Domains [InterPro]
DC_1773
STR
8–248
DC_1773 IPR057110
DC_0448
STR
195–457
DC_0448
WDQ44150.1
1 458
Architecture
STR
STR 8-458
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WDQ44150.1
1 458
Domain Start End Length (AA) Confidence
N-terminal 1 321 321 0,4545
Central domain 322 447 127 0,0205
C-terminal 448 458 10 0,9949
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-321
Central
322-447
C-terminal
448-458

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage ESa2
[NCBI] 		3027357 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WDQ44150.1 [NCBI]
Genbank nucleotide accession
OQ428188.1 [NCBI]
CDS location
range 85378 -> 86754
strand +
CDS
ATGGCATTAAATTTTACTACAATAACGGAAAACAATGTTATTAGAGACCTGACTACTCAGGTCAATAACATTGGAGAAGAATTAACAAAAGAAAGAAATATATTTGACATTACAGATGATTTAGTTTATAATTTTAATAAATCACAGAAAATTAAACTAACTGATGATAAAGGATTAACTAAATCGTATGGAAACATAACAGCTCTTAGAGATATAAAAGAACCAGGTTACTACTATATAGGTGCTAGAACATTAGCAACATTATTAGATAGACCTGATATGGAATCTCTTGATGTTGTTTTACATGTAGTACCTCTTGATACTTCTAGTAAGGTAGTTCAACATTTATATACGCTATCTACTAACAATAACCAAATTAAAATGTTATATAGATTTGTCTCAGGAAACTCTAGTTCAGAATGGCAATTTATTCAAGGATTACCTAGTAATAAAAATGCTGTTATATCAGGCACTAATATTCTAGATATAGCTTCACCAGGTGTTTACTTTGTTATGGGAATGACAGGAGGAATGCCTAGTGGAGTAAGCTCCGGATTTTTAGACTTAAGTGTAGATGCTAATGATAATAGATTAGCTAGACTAACTGATGCTGAAACCGGTAAAGAATATACTAGCATTAAGAAACCTACAGGAACATACACAGTATGGAAAAAAGAATTTGAGCCAAAAGATATGGAGAAATATCTACTAAGTAGTATTAGAGAAGATGGTAGTGCATCATTCCCACTCCTAGTTTATACTAGTGATAGTAAAACATTCCAACAAGCTGTTATAGACCATATAGATAGAACAGGTCAAACAACCTTTACTTTCTATGTTCAAGGTGGTGTGACAGGTTCTCCTATGTCTAATAGCTGTAGAGGATTATTCATGTCAGATACACCTAATACATCTAGTTTACATGGTGTTTATAATGCAGTAGGTACTGATGGTAGAAATGTAACAGGCTCAGTAGTAGGTAGTAGTTGGACTTTTCCTAAAACATCACCGTCACATAAAGAATTATGGACGGGAGCACAATCATTCTTATCCACAGGTACTACTAAGAATTTAGCAGATGATATTAGTAATTATTCTTATGTAGAAGTTTATACTAAACATAAGACATCAGAGAAAACTAAAGGTAATGATGATACAGGTACAATTTGTCATAAATTTTATCTAGACGGTAGTGGTACCTACGTTTGCTCAGGTACATTTGTATCAGGAGATAGAACCGATACAAAACCACCAATTACAGAATTTTATAGAGTAGGTGTATCCTTTAAAGGTTCAACATGGACTCTTGTAGATAGCGCAGTGCAAAATAGTAAAACTCAATATGTTACAAGAATTATAGGTATTAATATGCCATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
148899ce478681b00b286d7952bcf9a78b9dc072f4a07b2790e2c7821e02b5a6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7982
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome Sequence of Staphylococcus aureus Bacteriophage ESa2 Bird,J.T., Margulieux,K.R., Burke,K.A., Mzhavia,N., Kevorkian,R.T., Ellison,D.W., Nikolich,M.P. and Filippov,A.A. 2023-07-18 — GenBank