Protein

View in Explore
Genbank accession
XZO22067.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,87
Protein sequence
MFETRVKGRYTVTHMKATGEVLAQHTFDNLITNAGLDWICAMDTSDLFSQALAVSTSTADPNPAAPSLPEEVRRTTSYAPNGDVTSGLDGEWIYWHKRWRFPIGTLAGQVLATVGIVAQSAVGFESNTGAKIPAGTPLSYTRIKDAAGQPTTLVVQADEILDVQYELRSKAVAMAEAKFVISGVERTIRLTPLPFANRRNLYGERYIFYNERPRIDGKNASGADVQDGQWVKLYPRYTRGTYKGQLMLRATVDNGNMPGGITGCKDLKIYNGRNYALTIDPPVVKNNTQEFSITMEFSVARA
Physico‐chemical
properties
protein length:302 AA
molecular weight: 33255,28320 Da
isoelectric point:8,72749
aromaticity:0,09272
hydropathy:-0,29934

Domains

Domains [InterPro]
DC_1185
STR
1–302
DC_1185
XZO22067.1
1 302
Architecture
STR
STR 1-302
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage 20176-7-3
[NCBI] 		3373969 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa PAO1
[NCBI] 		208964 Bacteria > Proteobacteria > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XZO22067.1 [NCBI]
Genbank nucleotide accession
PQ510356.1 [NCBI]
CDS location
range 37314 -> 38222
strand +
CDS
ATGTTTGAGACGCGAGTTAAGGGTCGCTACACGGTGACCCATATGAAAGCCACGGGTGAAGTCCTGGCGCAACACACCTTCGACAACCTCATCACTAACGCAGGTCTTGATTGGATTTGCGCCATGGATACCTCTGACCTGTTCTCCCAGGCCCTGGCCGTGAGTACCAGCACTGCGGACCCTAACCCCGCCGCGCCCTCCCTGCCGGAAGAAGTTCGGCGCACCACCTCGTATGCCCCTAACGGCGACGTGACCTCGGGCCTGGACGGGGAGTGGATTTACTGGCACAAGCGGTGGCGCTTCCCAATAGGCACCCTGGCCGGTCAGGTACTGGCCACCGTGGGCATCGTAGCTCAATCCGCGGTGGGGTTTGAGAGTAACACCGGCGCGAAGATTCCGGCAGGTACTCCACTATCCTACACCCGGATCAAAGACGCCGCCGGCCAACCCACCACCCTGGTAGTTCAGGCTGACGAGATTCTCGACGTACAGTATGAGCTGCGCAGCAAGGCTGTGGCGATGGCCGAGGCCAAGTTCGTGATCTCCGGGGTTGAGCGTACCATCCGCCTCACCCCGCTGCCCTTCGCGAACCGGCGTAACCTCTACGGTGAGCGCTACATCTTCTACAACGAGAGGCCACGGATCGACGGCAAGAATGCGTCCGGTGCCGATGTCCAAGACGGTCAGTGGGTGAAGCTGTACCCGCGATATACTCGCGGCACCTACAAGGGTCAGCTTATGCTACGGGCCACCGTAGATAACGGCAACATGCCGGGGGGTATCACCGGCTGTAAGGACCTAAAGATTTACAATGGGCGGAACTACGCACTCACCATCGACCCTCCCGTAGTCAAGAACAACACTCAGGAGTTCTCCATTACAATGGAGTTCTCGGTGGCGAGGGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0fc6a8caf459d7ba930167b4f0afd8fbe634d19c6f03a6b2b6dd15aff20ed7f6
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7920
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Phage training: Pseudomonas aeruginosa Burke,K.A., A Filippov,A.A., Nikolich,M.P. and Peters,T.L. 1998-10 — GenBank