Protein

View in Explore
Genbank accession
AUR87089.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,90
Protein sequence
MTVKQFALGGVNEVVEFGKDGHQIDASNSGYIEIKNTGGTLIRVKGASATASDEFVTKLQLDAVNALAGGYLSFSYDASANISQLSGQGSGDAGAILYGDTYKVGTSGTFLGQSAQAGDLVTALVAGADVADNTASNTDWMLIEIRTASDLADGSSTDHSSGKLIVKDAGVTTDKLADNAVTLAKMADNSVDTSEIVDRAVTGAKVGLATLTDENHANNTITKGKLSASVQTTLSNADTEFGTRTPNLEAIIGASIDADTDNTVPAHANYATATNLHGQIAQLDTQIKNHDDIAALRKATVSHDGGAQNVGSSIASGRVLTTVMVTPVTVANGANCVMSIGVSGDTSKYVAAADIDLEEATTQVFHVNAELSGSEQIVATVTQGTATQGSFLVTVQHG
Physico‐chemical
properties
protein length:398 AA
molecular weight: 40590,15430 Da
isoelectric point:4,51406
aromaticity:0,04020
hydropathy:-0,04523

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR87089.1
1 398
Domain Start End Length (AA) Confidence
N-terminal 1 29 29 0,9674
Central domain 30 228 200 0,0234
C-terminal 229 398 169 0,9342
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-29
Central
30-228
C-terminal
229-398

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.094.O._10N.286.55.E12
[NCBI] 		1881400 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio sp. F12
[NCBI] 		2070776 Pseudomonadota > Gammaproteobacteria > Vibrionales > Vibrionaceae > Vibrio >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR87089.1 [NCBI]
Genbank nucleotide accession
MG592468 [NCBI]
CDS location
range 28843 -> 30039
strand +
CDS
ATGACAGTTAAGCAATTTGCCCTAGGTGGCGTAAACGAAGTAGTAGAGTTCGGTAAAGACGGCCATCAGATTGATGCGTCAAACTCTGGCTATATTGAAATTAAGAACACGGGCGGTACGCTTATTCGTGTTAAAGGCGCATCAGCTACAGCCTCAGACGAGTTTGTAACTAAGCTTCAACTTGACGCCGTAAACGCTCTTGCTGGTGGTTACTTGTCATTCAGCTACGATGCATCGGCTAACATTTCTCAACTATCAGGTCAGGGTTCTGGTGATGCTGGTGCGATTCTTTACGGTGATACGTACAAGGTGGGCACTTCTGGTACTTTCCTGGGTCAATCAGCTCAGGCGGGCGACCTGGTCACAGCTCTAGTTGCTGGCGCCGACGTTGCAGATAACACAGCGTCAAACACTGATTGGATGCTTATCGAGATTCGCACGGCTTCAGACCTTGCAGACGGCTCTTCAACTGACCACTCAAGCGGCAAGTTGATTGTTAAAGACGCAGGTGTAACAACTGATAAGCTTGCTGATAACGCAGTGACTCTTGCGAAGATGGCTGATAACTCTGTTGACACATCGGAGATTGTTGACCGCGCTGTTACTGGTGCAAAGGTTGGTCTTGCGACTCTTACTGATGAGAACCACGCAAACAACACAATCACTAAGGGTAAGTTATCCGCATCAGTTCAAACCACTCTATCTAATGCTGACACTGAGTTTGGCACTCGCACCCCCAACCTTGAGGCTATCATTGGCGCTTCAATTGACGCTGACACTGATAACACGGTTCCAGCTCACGCAAACTACGCTACAGCGACTAACCTACACGGTCAGATTGCTCAACTTGACACGCAAATCAAGAATCATGATGACATTGCAGCTCTTCGCAAAGCTACAGTATCTCACGATGGCGGCGCTCAAAACGTAGGTTCTTCAATTGCTTCAGGTCGCGTACTAACTACCGTCATGGTAACTCCGGTTACAGTGGCTAACGGCGCTAACTGCGTAATGTCTATTGGTGTGTCTGGTGATACTTCTAAGTATGTGGCTGCGGCTGACATTGACCTGGAAGAAGCTACTACTCAGGTATTCCACGTTAACGCTGAGCTATCAGGCTCTGAGCAAATCGTTGCTACTGTCACCCAAGGCACTGCGACTCAAGGCTCTTTCCTTGTAACTGTTCAACATGGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e7f4b764bda04cf8ac30b1888b00ab08d581c17f52d14b8fc0a9a36bcd826552
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7291
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank