Protein

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Genbank accession
QIG76198.1 [GenBank]
Protein name
tail fiber protein host specificity
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,62
Protein sequence
MTLPTSGPISIDDVATEFSLPTPVSMSDLYGLAVGIPNSGEISLSMFRGKGVNIEKTISTSVQNLNLTSLFTNEELNSPFDKLVFIDPGVTVGSLDPSLPAMRSGVFLGDLIIENHGNIFGAGGAGGTNGSPGLNGGDAILLDIAGVVIDNYGFIRGGGGGGGSGGIGGEGGDGVYSFTNRDPKIGSYYSRTAPKFYVYEYRFNGILGNVQWFWNDVQISSAFSNDYIQIGEVRYYKGEQRSYQRKENVASSVQEYTYYAIHQEYPISYGTEGGAGGDYKGAFSDGGHGQGYLISATKGKQGFAGEPGGTNAGKGGDGGVGGDGGTWGSPGSAGLAGKDGTNGNVSNGTAGQPGFSGGIAGRAITSNQIYTVNNFGTIDGSY
Physico‐chemical
properties
protein length:382 AA
molecular weight: 39281,51540 Da
isoelectric point:4,63473
aromaticity:0,10733
hydropathy:-0,26649

Domains

Domains [InterPro]
DC_1679
STR
1–200
DC_1679 DC_0422
IPR007932
RBD
112–167
IPR007932
QIG76198.1
1 382
Architecture
STR
RBD
STR 1-200 | RBD 201-382
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QIG76198.1
1 382
Domain Start End Length (AA) Confidence
N-terminal 1 71 71 0,9619
Central domain 72 326 256 0,9638
C-terminal 327 382 55 0,1844
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-71
Central
72-326
C-terminal
327-382

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RHph_I34
[NCBI] 		2509592 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIG76198.1 [NCBI]
Genbank nucleotide accession
MN988553.1 [NCBI]
CDS location
range 6645 -> 7793
strand -
CDS
GTGACTCTTCCTACTTCAGGTCCAATCTCTATCGATGATGTGGCAACGGAGTTTAGTCTTCCTACTCCTGTGAGCATGTCAGATCTGTACGGTCTCGCTGTCGGTATTCCGAATTCTGGCGAGATCTCTCTGAGCATGTTCAGAGGCAAAGGAGTCAACATCGAGAAGACAATCTCGACTTCGGTGCAGAACCTCAATCTGACGTCTCTGTTCACGAACGAAGAACTGAACTCACCTTTCGACAAACTCGTGTTCATTGATCCTGGTGTCACCGTTGGCTCTCTAGATCCGTCTCTTCCGGCGATGCGTTCTGGAGTCTTCCTCGGCGATCTTATCATCGAGAACCACGGAAACATCTTTGGTGCTGGCGGTGCTGGCGGAACGAACGGCTCTCCGGGTCTCAACGGCGGTGATGCCATTCTTCTCGACATCGCAGGTGTCGTTATCGACAACTACGGCTTCATCAGAGGTGGTGGCGGCGGTGGTGGCTCAGGAGGTATCGGTGGCGAAGGTGGAGACGGGGTCTATTCGTTTACGAACAGAGATCCGAAAATCGGAAGTTACTATTCCAGGACTGCTCCGAAATTCTACGTCTACGAGTATCGCTTCAATGGCATTCTCGGAAATGTTCAGTGGTTCTGGAACGACGTACAGATCTCTAGTGCATTTTCGAACGACTACATCCAAATCGGTGAAGTTCGTTACTACAAGGGCGAACAGAGATCATATCAGAGGAAAGAAAACGTTGCTAGTTCTGTCCAAGAGTATACGTACTACGCTATCCATCAGGAGTATCCAATCTCGTACGGAACAGAAGGTGGAGCCGGCGGAGACTACAAAGGAGCCTTCTCAGACGGAGGTCACGGTCAAGGTTACCTGATCTCTGCAACAAAAGGCAAGCAAGGTTTCGCTGGTGAACCTGGTGGTACGAATGCTGGCAAAGGCGGAGACGGAGGTGTCGGCGGAGACGGAGGCACTTGGGGTTCTCCAGGTTCTGCTGGTCTCGCAGGCAAAGACGGAACGAACGGAAACGTTTCGAACGGGACTGCTGGTCAACCAGGCTTCTCCGGTGGCATAGCTGGAAGAGCCATCACTTCGAACCAAATATACACTGTAAACAACTTCGGTACAATTGACGGAAGCTACTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
3b5e39e637e81080e794d40e6d2625cbb9f53bd590af5949a76cf4d5fcfad2d9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7980
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Patterns of diversity and host range of bacteriophage communities associated with bean-nodulatin bacteria Vann Cauwenberghe,J., Santamaria,R.I., Bustos,P., Juarez,S. and Gonzalez,V. 1998-01 — GenBank