Protein

View in Explore
Genbank accession
XEN39301.1 [GenBank]
Protein name
short tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,91
Protein sequence
MQNNTLKHISDESKYVTFDPAGSGFNQTITNVQDALSAISADGITGVPLATETVAGKARIATQLEVDAGVSTDTIITPATLSYKLQRPEASTTVLGVTQYATDEEAIAGIATNRTIVASSLKATIDNVFTVRVATESANGVMKISSTPAAQAGVDDTTAMTPLKTKQAIAAATALIPAWGPATESEQGVVRLATLPQLRDPGIRDGYSVSPFTLNQWQATESNLGAIKLSNAGQMDAGNDHTTAVTPWRFATTRATTGRAGTTILSNDLNGDGSKALSANSAVLPSNRAAVSAGVYEHDTAADNKYMTRNNLKSYLPVGTMTLAAYNYDTGNCLKCNGRWLNRHQWPELFAVIGFTYGGDWGDNFAIPDMRGLVPRGFDDGRGLDPGRGFGSYQEDTMQRITAGWTMDDQAVTSNYPPSGACEARDYGSVNYDAGSDDRRWRGFRMYFDSARQTRVSHETRQKNLALNYVIVAR
Physico‐chemical
properties
protein length:474 AA
molecular weight: 50773,78390 Da
isoelectric point:5,51272
aromaticity:0,07595
hydropathy:-0,35316

Domains

Domains [InterPro]
DC_0176
STR
1–450
DC_0176
IPR037053
ATT
305–371
IPR037053
SSF88874
STR
308–471
SSF88874
IPR011083
ATT
319–375
IPR011083
XEN39301.1
1 474
Architecture
STR
ATT
STR
STR 1-304 | ATT 305-375 | STR 376-471 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage BP13076
[NCBI] 		3241510 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica
[NCBI] 		28901 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XEN39301.1 [NCBI]
Genbank nucleotide accession
PQ118624.1 [NCBI]
CDS location
range 21044 -> 22468
strand +
CDS
ATGCAAAATAACACTCTAAAACATATATCAGACGAATCTAAATATGTTACATTTGACCCCGCGGGCAGCGGGTTTAATCAAACCATAACAAACGTGCAAGATGCTTTATCTGCAATTAGCGCTGATGGTATCACAGGTGTTCCACTAGCAACAGAAACTGTAGCCGGTAAAGCTAGAATTGCGACACAACTCGAAGTAGATGCGGGAGTTTCTACAGACACTATTATTACTCCTGCCACTCTATCATATAAATTGCAGCGCCCCGAAGCTAGTACTACGGTTCTTGGTGTAACTCAATACGCTACAGATGAAGAAGCTATTGCGGGTATTGCAACAAATCGTACTATTGTTGCTTCATCGTTAAAGGCAACGATAGATAATGTTTTTACAGTTAGAGTTGCTACTGAATCTGCAAATGGTGTAATGAAAATATCTTCTACTCCGGCCGCTCAAGCGGGTGTTGATGATACTACAGCAATGACACCATTAAAAACCAAACAAGCTATAGCTGCTGCCACCGCTCTTATTCCCGCTTGGGGACCAGCCACCGAATCAGAACAGGGTGTAGTTCGTTTGGCAACGTTACCACAATTAAGAGACCCGGGTATAAGAGATGGTTACTCTGTGTCCCCATTTACATTGAACCAATGGCAGGCGACTGAATCAAATTTAGGGGCAATTAAATTATCTAACGCCGGACAGATGGATGCCGGTAATGACCATACTACTGCAGTAACTCCATGGCGCTTTGCAACAACTCGAGCAACAACAGGTAGAGCAGGAACAACAATTTTATCTAACGATTTAAATGGAGACGGCTCTAAAGCATTATCAGCTAATTCGGCTGTTCTTCCTAGTAATAGGGCAGCAGTATCAGCTGGAGTATATGAACATGATACTGCAGCAGATAATAAGTACATGACACGAAATAATCTTAAATCTTATTTACCTGTTGGTACTATGACACTCGCAGCTTATAATTACGACACTGGTAACTGTTTGAAATGTAATGGTCGTTGGTTAAATAGACATCAATGGCCTGAATTATTTGCTGTTATTGGATTTACTTATGGCGGAGATTGGGGAGATAACTTTGCTATTCCTGATATGCGCGGCTTAGTTCCACGTGGATTTGATGATGGACGCGGACTGGACCCAGGCCGAGGCTTTGGTAGCTATCAAGAAGACACTATGCAGCGAATTACAGCGGGATGGACTATGGATGACCAAGCAGTAACGTCAAACTATCCTCCTTCGGGGGCATGTGAAGCTAGAGATTATGGTTCAGTTAACTATGATGCGGGTTCAGATGACAGAAGATGGCGCGGATTCCGTATGTATTTTGACTCAGCTAGACAAACTCGAGTTTCTCATGAAACTCGTCAGAAGAACCTTGCACTTAACTATGTAATTGTAGCTCGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d4a798f5dac5968f62bd1f7388d54c6d72699c84229badd954337e4f8e497f2d
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8022
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50