Protein

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Genbank accession
QID21038.1 [GenBank]
Protein name
non-contractile tail tubular protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,65
Protein sequence
MPLYTQSIKNLKGGISQQPDILRFSDQGEQQINGWSSESDGLQKRPPTVWKRRLSAVNWVIPNTAKFHLINRDETEQYYIVFTGKDIMVFDLEGNQYAVTGGMTYVNTDKPRDDIRVITVADYTFIVNRRTTVLADKATAHVGYNMKNRALINLRGGQYGRKLKVGINGGTKVEHQLPPGDNAKDDPPKVDAQAIGAALIALLTPAYPGYTFTLGSGYIEIKAPAGGSITSVETEDGYANQLINAVLDTVQTISKLPLAAPEGYIIRIQGETNSSADEYFVRYDSARKTWRETVEPGTITRFDSSTMPHALVRQADGSFKFQTLDWGERGAGNEDTNPMPSFVNSRINDVFFYRNRLGFLSGENVIMSRSAGYFAFFPKSVATLSDDDPIDVAVSHPRISILKYAVPFAEQLLLWSDEVQFVMTSSGVLTSKSIKLDVGSEFAVSDNARPFAIGRSVFFAAPRGSFTSINRYFAVADVTDVKDADDTTGHVLSYIPNGVFDIQGSSTENFITVSTEGAPNNLFVYKFLFKDGVQLQASWSHWELEQGEQIMASACIGSSMYLVRKHGYGVDLEKLEFIKETVDIGGEPYRLHIDGKTTMVVPTNAFNPDTYTTSFDVGAAYGGVFPPAGRYLMVDSSGRFVALPDTVWSSTRWVTVKGDWSGKTVFLGRVYKFTYAFSRFLIKYEDQNGTVTEDSGRLQLRRAWVNYQRTGALAMRVVNQQREFVNTLNGYKLGLQDVGTVNIGDGQFRFPMNGDALQTRLILESDYPTPVSIVGCGWEASYARKAKSI
Physico‐chemical
properties
protein length:789 AA
molecular weight: 87472,46020 Da
isoelectric point:5,97846
aromaticity:0,11280
hydropathy:-0,26401

Domains

Domains [InterPro]
IPR058003
TTP
1–789
IPR058003
QID21038.1
1 789
Architecture
TTP
TTP 1-789
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QID21038.1
1 789
Domain Start End Length (AA) Confidence
N-terminal 1 141 141 0,9891
Central domain 142 347 207 0,1004
C-terminal 348 789 441 0,2202
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-141
Central
142-347
C-terminal
348-789

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage RDN8.1
[NCBI] 		2600100 No lineage information
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QID21038.1 [NCBI]
Genbank nucleotide accession
MN414250 [NCBI]
CDS location
range 24360 -> 26729
strand +
CDS
ATGCCACTTTATACACAATCAATCAAGAACCTGAAGGGTGGCATTAGCCAACAGCCTGACATCCTGAGGTTCTCGGACCAAGGGGAGCAGCAGATTAACGGCTGGTCTTCCGAGAGTGATGGTCTACAGAAGCGCCCGCCTACCGTCTGGAAGCGGAGGCTCTCAGCGGTGAACTGGGTTATTCCTAACACAGCGAAGTTCCACCTCATCAACCGGGACGAGACCGAGCAGTATTACATCGTCTTCACCGGGAAGGACATCATGGTCTTTGACCTTGAGGGGAACCAGTACGCTGTTACAGGTGGCATGACCTACGTAAACACTGATAAGCCGAGAGACGACATCCGGGTAATCACCGTGGCTGACTATACGTTCATCGTGAATCGCCGCACTACGGTCCTCGCAGATAAGGCCACGGCGCACGTTGGATACAACATGAAGAACCGGGCGCTGATTAACCTTCGGGGTGGTCAATACGGTCGCAAGCTGAAGGTCGGTATTAATGGTGGGACCAAGGTTGAACACCAGTTGCCTCCGGGCGATAACGCTAAGGATGACCCACCTAAGGTTGATGCTCAGGCTATCGGTGCCGCTCTTATTGCTCTGCTGACTCCAGCGTATCCGGGCTACACGTTCACCCTTGGGTCTGGCTACATTGAGATTAAGGCCCCTGCTGGCGGTTCTATTACCTCAGTGGAGACCGAGGACGGGTACGCTAACCAGTTAATCAACGCTGTGCTGGACACTGTGCAGACTATCAGCAAGCTGCCTCTGGCAGCACCTGAGGGCTACATTATCCGCATCCAAGGGGAGACCAATAGTTCTGCCGATGAATACTTCGTTCGGTATGACTCAGCGCGTAAGACTTGGCGTGAGACCGTGGAGCCGGGGACTATAACCCGCTTCGATTCGTCCACTATGCCACACGCTCTGGTCCGTCAGGCCGATGGTAGCTTTAAGTTTCAGACTCTGGACTGGGGCGAGCGTGGAGCGGGTAACGAGGACACCAACCCTATGCCGAGCTTCGTGAACTCTCGGATTAACGATGTGTTCTTCTACCGCAACCGCTTGGGGTTCCTCTCTGGTGAGAACGTCATTATGTCCCGTTCGGCTGGATACTTTGCGTTCTTCCCGAAAAGTGTGGCGACCTTAAGTGATGACGACCCGATTGATGTGGCTGTGAGCCACCCTCGAATCTCCATCCTGAAGTATGCCGTACCGTTCGCTGAGCAGCTCCTCCTTTGGTCCGATGAGGTCCAGTTCGTGATGACCAGCTCTGGGGTACTGACCTCTAAGTCCATCAAGCTTGACGTTGGCTCTGAGTTCGCTGTGAGTGATAACGCCAGACCTTTCGCTATTGGACGCTCAGTCTTCTTTGCGGCCCCTCGTGGCTCGTTCACCAGCATTAACCGCTACTTTGCGGTGGCTGACGTAACGGACGTGAAGGACGCTGACGACACGACAGGTCACGTTCTGTCTTACATCCCCAACGGAGTGTTTGACATCCAAGGTTCCTCGACTGAGAACTTCATCACGGTATCCACTGAGGGCGCGCCCAATAATCTGTTTGTGTACAAGTTCCTCTTTAAGGATGGCGTACAGCTTCAGGCATCGTGGTCTCACTGGGAGCTGGAGCAGGGAGAGCAGATTATGGCCTCAGCCTGTATCGGGTCCTCTATGTACCTCGTTCGCAAGCATGGATATGGGGTGGACTTGGAGAAGCTGGAGTTCATCAAGGAGACCGTGGACATCGGAGGTGAGCCGTACCGACTGCACATCGACGGTAAGACGACTATGGTCGTGCCGACTAATGCGTTCAACCCGGACACCTACACTACGTCCTTCGACGTGGGGGCCGCTTACGGTGGGGTCTTCCCGCCAGCAGGTCGATACCTCATGGTAGACTCAAGCGGGCGATTCGTCGCTCTACCGGATACCGTGTGGTCCAGCACTCGCTGGGTGACAGTGAAGGGTGACTGGTCCGGGAAGACTGTATTCCTCGGTCGTGTCTATAAGTTCACCTACGCCTTCTCTCGGTTCCTCATCAAGTATGAAGACCAGAACGGGACGGTGACGGAGGACTCTGGGCGCTTGCAGCTTCGTCGCGCTTGGGTGAACTACCAGCGGACTGGTGCGCTTGCTATGCGAGTCGTCAACCAGCAGCGTGAGTTCGTTAACACCTTGAACGGCTACAAGCTGGGACTACAGGATGTAGGGACGGTGAACATCGGAGATGGTCAATTCCGCTTCCCGATGAATGGAGATGCCCTGCAAACTCGGTTAATCCTTGAGTCCGACTATCCGACCCCAGTGTCAATCGTTGGGTGCGGCTGGGAGGCCTCCTACGCACGGAAAGCTAAATCCATCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
925d747d364b70a77c84e949378080b2179227970e3970e7424af5142ea4f07f
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3196
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50