Protein

View in Explore
Genbank accession
QIG75269.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MAVILPSTYTDGTAVCTNGSPNVVGTGTMWLNTILPGDFFWTPSGESVRILTVVDDTHITLAYNWPGATQATGPYEIRFQSDQGRVQETTRQLLERMQSGNLYAFAGLNGLTDTVPYFTGPGAMGLLTREELTSGVNYDVVVDTLPDRDAYDSQATGFTVLVADIGDGRAAVFFKNSVAVGDWSAPAYVTGPRGLRWRGDWSNATAYDEDDAVSYNGASYIALVDNTNVTPVAGATWGSLAARGATGLTGVNPRGTYSGATAYAISDAVLYNGSTYVAIAATTGNAPPTPPTTSNTWWQLLALKGTDGTGTGDVVGPAGVVDGNAAMFNGVTGKLIKAATPSEFRTWLAQTAATVSFNNSVANLPGAPTTTQAAIESLAANSGGKNDSIFALEIADLKGQRTGMNGGVADAFADTSGINLSSGGIDTNTLLMLHCDGLNNSTSFPDSSSNNRTVTAVADAKVSTSQSVFGGASVVLDGTGDYLSVPDSDDFAFGTGNFTIDMRVRVTNFGGGGMFVSHENPGTPLNCYRFYVASTGAVYFQLYSANSLVFNINSAAGVVALNTWYHIAVVRNGNTFTIYANGVSVATGTSTASIPNYTGPLKFGMGPTSNNQFFNGFFDEIRVSNVARWTANFTPPATAYFTDTSSSQNYIYDATNDWFIPTGSQITAATASDTTAAISGSVTYTVVDRTLSIPNNATIAAVGIYSTSSFTTAFKIVRRTAAGTYDVLASYAFTHPGGGWYDYTLPTPYVTPSSGTLMPAALVPAAFTANIYTTTRGFKSGDQAVATGVTGWTEDSGLTPIYRLSYLVDNMTLISTIYPAVSVPTTARIALQLADSVTLVPNTDFSAEVSRDGGTTWTAATLALLMNFNGLKVYEGTVSLTGQPSGSNMQWRVKSLTNKIVIASGVVLQQS
Physico‐chemical
properties
protein length:911 AA
molecular weight: 95397,68390 Da
isoelectric point:4,57653
aromaticity:0,10318
hydropathy:0,01679

Domains

Domains [InterPro]
DC_1819
STR
140–253
DC_1819 IPR003610 G3DSA:2.60.120.200 DC_2089
IPR003610
CBM
198–240
IPR003610 G3DSA:2.10.10.20 IPR013320
G3DSA:2.10.10.20
ATT
200–240
G3DSA:2.10.10.20 DC_2256 PF13385
IPR013320
STR
425–635
IPR013320
QIG75269.1
1 911
Architecture
STR
ATT
STR
ATT
STR
RBD
STR 140-199 | ATT 200-240 | STR 241-253 | ATT 254-300 | STR 301-635 | RBD 636-911
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RHph_Y21
[NCBI] 		2509774 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIG75269.1 [NCBI]
Genbank nucleotide accession
MN988544.1 [NCBI]
CDS location
range 20638 -> 23373
strand -
CDS
ATGGCTGTCATTCTCCCATCGACGTACACGGACGGCACCGCCGTTTGCACGAACGGTTCGCCGAATGTTGTCGGCACGGGTACGATGTGGTTGAACACGATCCTGCCGGGCGATTTCTTCTGGACGCCTTCGGGCGAATCCGTGCGTATTCTGACGGTCGTCGACGATACACACATCACGCTCGCTTACAATTGGCCCGGCGCGACACAGGCAACCGGACCGTATGAAATCCGGTTCCAGTCCGATCAGGGGCGCGTGCAAGAGACGACCCGTCAGCTTCTTGAACGGATGCAGTCGGGCAACCTGTACGCGTTCGCCGGCCTGAACGGGCTGACGGATACCGTTCCGTACTTCACCGGGCCGGGCGCAATGGGTCTCCTGACCCGCGAAGAACTGACCAGCGGCGTCAATTACGACGTCGTCGTTGACACGCTGCCGGATCGTGACGCGTATGACAGCCAAGCAACCGGCTTCACCGTCCTTGTCGCGGATATCGGCGACGGCCGGGCGGCTGTGTTCTTCAAAAACTCCGTGGCGGTTGGCGACTGGTCGGCACCGGCCTACGTCACAGGCCCGCGTGGTCTCCGCTGGCGTGGCGACTGGTCGAACGCGACGGCATATGACGAAGATGACGCGGTTTCCTACAACGGCGCGTCTTATATCGCGCTGGTCGACAATACGAACGTGACGCCCGTTGCCGGCGCAACGTGGGGTTCTCTCGCAGCGCGTGGCGCGACCGGCCTGACCGGTGTCAATCCACGCGGCACTTATTCGGGCGCGACCGCTTACGCAATTTCGGATGCGGTTCTTTACAACGGCTCGACATACGTCGCAATCGCCGCAACGACCGGCAACGCACCGCCGACGCCGCCGACAACGTCTAATACATGGTGGCAACTGCTCGCACTGAAGGGCACGGACGGCACCGGAACGGGTGACGTGGTCGGTCCGGCTGGCGTCGTCGACGGAAACGCCGCGATGTTCAACGGTGTGACCGGTAAGCTGATCAAAGCCGCGACGCCTTCGGAATTCCGGACGTGGCTTGCGCAAACCGCCGCGACCGTGTCTTTCAACAACTCGGTTGCGAACCTTCCCGGCGCGCCGACGACCACACAAGCCGCGATCGAGTCCCTTGCTGCGAACAGCGGCGGCAAGAATGATTCGATCTTCGCGCTTGAAATCGCCGATCTGAAGGGGCAACGTACGGGCATGAACGGCGGCGTCGCCGACGCCTTTGCCGACACATCCGGAATCAACCTTAGTTCAGGCGGTATCGACACAAATACGTTACTCATGTTGCACTGCGACGGTTTGAACAACTCGACATCGTTTCCCGATTCGTCCAGTAATAACCGTACGGTGACCGCTGTCGCTGACGCAAAGGTCAGTACCTCACAATCCGTTTTCGGCGGCGCATCGGTCGTACTGGACGGCACCGGTGATTATCTTTCAGTTCCGGACTCGGACGACTTCGCGTTCGGGACCGGGAACTTCACAATTGACATGCGCGTTAGGGTGACGAACTTCGGCGGCGGCGGCATGTTCGTTTCCCATGAAAATCCGGGAACACCGCTGAACTGCTATCGCTTTTACGTAGCATCCACCGGAGCGGTATATTTCCAGCTTTATTCGGCGAACTCGCTTGTCTTCAACATCAACAGCGCCGCCGGTGTCGTCGCGCTCAATACGTGGTATCACATCGCGGTTGTCCGGAACGGCAACACCTTCACAATTTACGCAAACGGCGTGTCCGTTGCGACCGGCACAAGTACCGCGTCAATTCCGAACTATACCGGCCCGTTGAAATTCGGTATGGGTCCGACCAGTAACAACCAGTTCTTTAACGGGTTCTTCGATGAAATCCGAGTTTCGAACGTTGCCCGCTGGACCGCGAATTTCACGCCGCCGGCAACCGCATATTTCACCGATACAAGTTCGTCGCAGAACTATATTTACGACGCAACGAACGATTGGTTCATTCCGACCGGATCACAAATTACCGCTGCGACAGCTTCAGACACAACGGCGGCAATATCGGGGTCAGTGACTTACACTGTAGTTGACCGGACGCTTTCGATCCCGAACAACGCCACGATTGCGGCGGTCGGCATTTATTCGACATCTTCTTTCACAACGGCGTTCAAAATCGTGCGCCGCACCGCTGCCGGCACATACGACGTATTGGCATCGTATGCATTCACCCATCCCGGCGGCGGATGGTACGATTATACGTTACCGACACCATACGTGACCCCGTCTTCGGGTACGTTGATGCCGGCAGCGTTGGTCCCGGCCGCGTTTACTGCGAACATCTACACAACCACCCGTGGATTCAAGTCCGGCGACCAAGCTGTCGCAACCGGCGTCACTGGTTGGACGGAAGACAGCGGACTTACTCCAATTTACCGCCTGTCATACCTTGTCGACAACATGACTCTGATTTCGACGATCTATCCCGCCGTGTCAGTTCCGACAACGGCGCGTATCGCCCTGCAACTCGCCGACTCGGTGACGTTGGTTCCGAATACCGACTTCAGCGCCGAAGTGTCGCGCGACGGCGGTACGACGTGGACGGCGGCGACACTTGCCCTGTTGATGAACTTCAACGGCCTGAAGGTTTACGAAGGAACGGTCAGCCTAACCGGTCAGCCTTCGGGTTCAAATATGCAATGGCGCGTGAAGTCGCTGACGAACAAAATCGTCATCGCTTCGGGCGTCGTCCTGCAACAATCGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
e37969a89c23cbe32bd33efede4fae1cf14dfd557a26b5ec32469a3cbce9b462
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8278
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Patterns of diversity and host range of bacteriophage communities associated with bean-nodulatin bacteria Vann Cauwenberghe,J., Santamaria,R.I., Bustos,P., Juarez,S. and Gonzalez,V. 1998-01 — GenBank