Protein

View in Explore
Genbank accession
WJJ59236.1 [GenBank]
Protein name
long tail fiber proximal subunit
RBP type
TSP
Evidence RBPdetect
Probability 0,64
Protein sequence
MADSIKRKFRGADGFDAAGEKIVNVATADRTVLSDGVNVEFLIQENTLQQYDSTRGYTSGFAVIYDNRIWVSNRDIAKPAGNFNELYWTSVRTDAKWRVVSSGTTILKSGEFISVDTAKGNDMIFTLPNNPQDGDTIMLKDIGNKTGTVGVTINASIQDIVLRGPTNKVRSVKMTHPLSQYVFVFSNRLWNLYVSDYERVARIVTPSAVVQAQSNDFIVRRYTSPDPIRVTLPKHANTGDIINFTDLDGKNPQFHMIVSTFDDNTNIGTVGQKSVEVRTSGDGFIIYDESESIWRIWEGDLRPRMRVITDNVTLIPNEVVTVFGVNNSTQKTIDITLPTDIAIGDTVTIAMNYMRKGQKVNIRAATGDKIASSLQLLQFPKRSEYPPDTTWVMNDVLTFDGTTSYVPVLQLSYIEHAGSKYWIVADNAPTVERVDSKDNETRKRLGVIALASQDQANVDHENNPEKELAITPQTLANRVATKVRRGIARLVTLTEIQALTPGPHLDDVIVTPAMLNEKTATETRRGVAETATQAEANGSTDDERIITPKKLHNRIASEILTGILKLVRTTGTLAGIGRDTKGTNVYDYDNNIDAVTPKSLFQFKSTEQAQGGVYLATQNEVIAGGPAQPGFPVVVTPQTLHGKTSTDSRIGLIQIAKQAEVDTGTDYTKAVTPKTLNDRKAREDLSGIAEIATQVEFDTGTDDTRIVTPLKVKTRFNSTDRTSVVALSGLVEQGTLWDHYTLDIKEASETQRGTAALATQVQVDAGTDDKTIVTPKKLQAKKATETTEGIIQVANQAETVAGTIANKAVSPKNFKYVVQEEKTWESTIAQRGFVKLSEKALTFKGDTLNGSGRLLPGDLINEPALTDLPKEGYAVSPYEMNRALQYFLPAKAKAVDSDLLDGIDSTQFVRRDIDQVVNGKITFKKDVTLEAPLVSSSTAKFTTVNATISVDIGDSLGNSRINLNTLANGWNIETLANGSTLDFTATDKVLTLNRNGNVTVAQTLTAMNKVDANKGFSVEGGTMVINPSSTEIVIGTQSKQVTLQNKDAKTFSVVDPSGTYTILNTKNAFEITAQGFVKKAGDSMTGPLQIQAPLTVQIPEGRVAPDVKPSDDNPASWSASITSAAIYNKLPGFGVPVMEKDAEGQDTGFVDHYEYVKGPGVLTQHGIGKTAVYQIWAPRPTVQELNHNAQTFWIRNFNIVTGEWDEFGKMYTSVQRPTAGEIGAVSTSGSAFNNLTIRDWLQIKNVRIVPNETTRTVDFIWVDE
Physico‐chemical
properties
protein length:1264 AA
molecular weight: 138144,66860 Da
isoelectric point:5,54614
aromaticity:0,06883
hydropathy:-0,32033

Domains

Domains [InterPro]
DC_1986
ATT
13–136
DC_1986 DC_1209
IPR048391
ATT
1116–1211
IPR048391
WJJ59236.1
1 1264
Architecture
ATT
STR
ATT
STR
ATT 13-136 | STR 345-1115 | ATT 1116-1211 | STR 1212-1254 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WJJ59236.1
1 1264
Domain Start End Length (AA) Confidence
N-terminal 1 977 977 0,9176
Central domain 978 1176 200 0,2336
C-terminal 1177 1264 87 0,3626
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-977
Central
978-1176
C-terminal
1177-1264

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage vB_KpnM_VPA32
[NCBI] 		3041494 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WJJ59236.1 [NCBI]
Genbank nucleotide accession
OP558005 [NCBI]
CDS location
range 156324 -> 160118
strand +
CDS
ATGGCAGATTCAATCAAACGCAAGTTTCGTGGCGCTGACGGCTTCGATGCTGCGGGTGAAAAAATAGTCAACGTTGCTACTGCTGACCGCACGGTGTTATCCGATGGCGTCAACGTTGAATTCCTTATCCAAGAAAACACATTACAACAGTATGATTCTACTCGTGGTTACACTTCCGGTTTCGCAGTAATTTACGACAACCGCATTTGGGTTTCAAATCGTGATATTGCAAAACCTGCTGGCAATTTTAATGAGCTTTATTGGACTTCGGTTCGTACCGACGCAAAATGGCGTGTAGTTTCAAGCGGAACAACAATTTTAAAATCAGGTGAATTTATTTCTGTCGATACCGCAAAAGGTAATGACATGATTTTCACTTTACCAAATAATCCGCAAGATGGTGATACAATTATGCTGAAGGATATCGGTAATAAAACCGGTACCGTTGGTGTAACTATCAACGCATCTATTCAAGACATTGTGTTGCGTGGCCCTACGAATAAAGTTCGCTCAGTCAAAATGACTCATCCGCTGTCTCAATATGTGTTTGTGTTCAGCAATAGATTGTGGAATCTTTACGTTTCTGATTACGAACGAGTTGCTCGTATTGTAACACCAAGCGCAGTTGTTCAAGCTCAATCTAACGACTTTATAGTTCGCAGATATACTTCTCCAGACCCAATCCGTGTTACTTTGCCTAAACATGCAAACACTGGAGATATCATCAACTTTACTGACCTTGATGGAAAGAACCCTCAATTCCATATGATTGTTAGTACTTTCGATGATAACACCAATATCGGTACTGTTGGTCAAAAATCTGTAGAAGTTCGTACTTCTGGTGACGGATTCATCATATACGATGAATCAGAGTCAATCTGGAGAATCTGGGAAGGCGACTTACGTCCGCGCATGCGTGTGATCACCGACAACGTAACTTTAATTCCAAACGAGGTTGTTACTGTTTTTGGTGTAAATAACAGCACTCAGAAAACTATTGATATAACTTTACCTACTGATATTGCTATTGGCGATACTGTCACTATTGCAATGAATTATATGCGCAAAGGACAGAAAGTAAATATCAGAGCAGCTACTGGAGATAAAATTGCTTCAAGTCTTCAATTACTGCAATTCCCTAAACGCTCAGAGTATCCGCCTGATACCACTTGGGTAATGAATGATGTTCTTACTTTTGACGGTACTACTTCTTATGTTCCAGTATTGCAATTATCTTATATTGAACATGCTGGAAGTAAATACTGGATTGTTGCTGATAATGCTCCGACGGTAGAACGTGTTGATTCAAAAGATAATGAAACTCGTAAACGCTTAGGTGTTATTGCATTAGCAAGTCAAGACCAAGCAAACGTTGACCACGAAAATAATCCAGAAAAAGAGTTAGCAATTACTCCTCAAACTCTGGCAAACCGTGTTGCTACTAAAGTTCGTCGTGGTATTGCTCGTTTAGTTACTTTAACTGAAATCCAAGCTCTAACTCCTGGGCCGCATTTGGATGATGTTATTGTCACTCCTGCGATGCTGAATGAAAAAACAGCAACAGAAACTCGTCGTGGTGTTGCTGAAACTGCTACTCAAGCCGAAGCAAATGGTTCAACCGACGATGAACGTATCATCACTCCGAAGAAGCTGCATAACCGTATTGCTTCTGAGATTTTGACTGGTATTCTTAAATTAGTCAGAACGACTGGAACTCTTGCGGGTATTGGACGTGATACAAAAGGTACTAACGTTTATGACTATGATAACAACATTGATGCGGTAACTCCAAAATCATTGTTCCAATTCAAGTCTACTGAGCAAGCTCAGGGCGGTGTTTATCTTGCAACTCAAAACGAAGTAATTGCTGGTGGTCCAGCTCAACCTGGTTTCCCAGTAGTTGTTACTCCACAAACGCTTCATGGTAAAACTTCAACTGATTCAAGAATCGGTTTGATTCAAATTGCTAAACAAGCTGAAGTAGATACTGGTACAGATTACACAAAAGCAGTTACTCCTAAAACTCTGAATGACCGTAAAGCTCGTGAAGATTTAAGTGGTATTGCTGAAATTGCAACTCAAGTTGAATTTGATACCGGAACGGACGATACACGTATCGTAACTCCATTAAAGGTTAAAACTCGTTTCAATTCAACCGATAGAACATCTGTTGTTGCTCTGTCTGGATTAGTTGAGCAAGGAACCTTGTGGGACCATTATACATTAGATATCAAAGAAGCATCTGAGACTCAGCGTGGTACTGCTGCTCTGGCCACTCAAGTACAAGTTGATGCTGGTACTGATGATAAGACGATTGTTACGCCTAAGAAATTACAGGCTAAGAAAGCAACTGAAACTACCGAAGGTATTATCCAAGTTGCCAACCAAGCCGAAACAGTAGCCGGTACTATTGCTAATAAAGCAGTTTCTCCTAAGAACTTTAAGTATGTTGTCCAAGAAGAAAAAACTTGGGAATCTACTATAGCTCAGCGTGGTTTCGTTAAATTATCAGAAAAAGCACTCACCTTTAAGGGTGATACTTTAAATGGTTCTGGTCGTCTGCTTCCAGGTGATTTAATTAACGAACCCGCTTTAACAGATTTGCCTAAAGAAGGTTATGCAGTATCTCCATATGAGATGAACCGTGCTCTGCAATACTTCTTGCCGGCTAAAGCAAAAGCTGTTGATTCGGATTTACTGGATGGAATTGATTCAACTCAGTTTGTTCGCCGCGATATCGACCAAGTAGTTAATGGTAAAATTACATTCAAAAAGGATGTTACTCTAGAAGCTCCTCTGGTGTCCTCTAGTACGGCCAAATTCACTACCGTGAATGCTACTATATCTGTTGATATTGGTGATTCTCTGGGTAATTCTAGAATCAATTTGAATACTCTGGCGAATGGTTGGAACATTGAAACTCTGGCGAATGGTTCAACTCTCGATTTTACTGCTACAGATAAAGTTCTGACGCTTAATCGCAATGGAAACGTAACGGTTGCTCAGACTCTGACGGCAATGAATAAAGTTGATGCTAATAAGGGCTTTTCAGTCGAAGGTGGTACAATGGTTATCAATCCTTCCTCTACTGAAATTGTCATTGGTACTCAATCTAAGCAAGTAACATTGCAGAACAAAGATGCTAAGACATTCTCAGTTGTAGACCCTTCTGGCACTTACACCATTCTGAATACCAAGAATGCTTTTGAAATAACGGCTCAAGGGTTCGTTAAGAAAGCGGGTGATTCAATGACTGGGCCACTTCAAATTCAAGCTCCATTAACTGTTCAGATTCCTGAAGGACGAGTTGCTCCTGATGTTAAACCATCAGATGATAACCCAGCTTCATGGTCTGCATCAATTACATCAGCAGCAATTTACAATAAATTGCCTGGTTTCGGTGTTCCAGTTATGGAAAAAGATGCTGAAGGACAAGACACTGGTTTCGTAGACCATTACGAATATGTTAAAGGCCCAGGTGTATTAACTCAACATGGTATTGGTAAGACTGCGGTCTATCAAATTTGGGCACCTCGCCCAACTGTACAAGAGTTAAACCATAATGCTCAAACTTTCTGGATTCGTAACTTTAACATCGTCACTGGTGAGTGGGACGAATTTGGTAAGATGTACACTTCCGTTCAGAGACCTACTGCAGGGGAAATTGGTGCTGTATCAACCTCAGGTTCAGCGTTCAATAACTTAACGATTCGTGATTGGTTGCAGATTAAGAACGTTCGTATTGTTCCTAATGAAACTACTCGTACTGTTGACTTCATATGGGTTGATGAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e8640293e7953edcc0da4c680d2f2d56f351ffe413ed9c1adde9cfa04ed0edf0
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2654
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50