Protein

View in Explore
Genbank accession
XPN51405.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,68
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MSVVTEKRHQPLRGSKGGSSKPKQPHIAQNGVASLSTARIVYLLSWGPIVGPVNGLKSIKLDGTPIQAEDGTLNYPDVKWQFRPGELNQERLEGVAESSNEIAVGQTLLSTQPYIYTVTNATADAVRVRLSWPNLQAQDSSGNINGVRIEYAIDVATDGAPYQTVLSTFVDRKNVTTYYRSHRINLPAGGHWAVRVRRITPEANSSLVQDTMMLTAIAEVVDSNQEFPLTAVGCVEYDAQQFGGDFPKFSALMRGRIVRVPMNYDPETRTYFTGGPGTTNGVWDGTFKEAYSNNPAWVFYDLVLNPYYGLGERIDQSMVNRWALYRIAQYCDQLVPDGKGGQEPRFTCNLYLQKQEEAYAVLQDLAAIFHGLAFWDGSQITVNADMPQDPVYTYSTSQILNDGVVAYSGTRTRDRHSLAMVSWDNPANAFETDKEPVFDEDAIIELGGIVREVSVGALGCTSQGQAQRAGQWALMTEQLQTRGAVWKVGLDGFIPRPGQVVALADPMLAGRANGGRISAVSGRAITVDRDVDIPVGARLRVNLPSGRSEARAIQGHDGRVITVVADFSEEPSPESGWAIDYDDLALMQFYVKNVTRPSWEQFQLEVIQHEPGKFDAIDHGAIIDSRPISVLPSGVQDPPARVLISQHIAVEQGLAVTIMTIAWDAAPDAVAYDVEWRWGSREWVRVPRTGELMVEVRGVYTGQYLARVRAVNSMNVSSIPANSVLTNITGKTGAPPALAFLRTTSGPWKIGLEWGFPASGAADTAYTEIQQSVTPGGSEQNATALGLFAYPTDTHTLTSLAAGARLAFRGRLIDRTGNVGPWSAWVDGISSTDASEYNELITKEYVESALGEQFFENIEQIGGNVDQLMEQYYDAGTVYQKGQIVRLNGRFYQALQDVPAGNPPPNPVYWADVGELVESVDALALRVTENAAAIEELDGVVQSSASSLDVLQAAARREPATGEKADALKGWDTIARAATEVIVRANEIEAQAKRVETVQAQTSANGAAIQTTQSVVASLDQGVKAMYSVKLQAHANGQQYATGFQLGFDSGTSVTTMAFQADRFLWFNSSSGQTVAPVSIVGGQMFINNAMIQDGSITNAKIGNVIQSTALGANGEPLWKLDKAGSLTMNSATSGGFMRQTAEAVKVYDANLVLRVQIGNLDA
Physico‐chemical
properties
protein length:1163 AA
molecular weight: 126041,73050 Da
isoelectric point:4,94530
aromaticity:0,08340
hydropathy:-0,20817

Domains

Domains [InterPro]
DC_0014
STR
2–1163
DC_0014
IPR053171
Unmapped
6–954
IPR053171 IPR015406
IPR055385
ATT
99–222
IPR055385 IPR032876 IPR036116 G3DSA:2.10.10.20
XPN51405.1
1 1163
Architecture
STR
ATT
STR
ATT
STR
ATT
STR
STR 2-98 | ATT 99-222 | STR 223-353 | ATT 354-521 | STR 522-871 | ATT 872-915 | STR 916-1163
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XPN51405.1
1 1163
Domain Start End Length (AA) Confidence
N-terminal 1 519 519 0,8904
Central domain 520 1029 511 0,0547
C-terminal 1030 1163 133 0,3642
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-519
Central
520-1029
C-terminal
1030-1163

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage phita81A
[NCBI] 		3387544 Viruses > unclassified bacterial viruses >
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XPN51405.1 [NCBI]
Genbank nucleotide accession
PQ738200.1 [NCBI]
CDS location
range 17948 -> 21439
strand +
CDS
ATGTCTGTTGTGACCGAGAAGCGCCATCAGCCTTTGCGTGGAAGCAAGGGGGGCAGTTCCAAGCCGAAGCAGCCGCACATCGCCCAGAACGGCGTCGCATCGCTGTCCACTGCTCGGATCGTGTATCTCCTGAGCTGGGGTCCGATTGTTGGCCCAGTCAATGGACTCAAGTCGATCAAGCTTGACGGTACTCCGATCCAGGCAGAAGACGGCACGCTGAACTATCCCGACGTGAAGTGGCAGTTTCGACCGGGCGAGTTAAATCAGGAGCGACTGGAAGGTGTAGCGGAGTCCAGCAACGAGATTGCGGTGGGCCAGACCTTGCTCAGCACGCAGCCCTACATCTACACCGTCACGAACGCCACGGCGGATGCGGTACGCGTGCGCCTGTCCTGGCCCAACCTGCAGGCGCAGGATTCGTCCGGGAACATCAATGGGGTGCGCATTGAGTACGCGATCGATGTCGCCACGGATGGCGCTCCTTACCAGACCGTACTCAGCACGTTTGTCGACCGGAAGAACGTTACGACTTACTACCGTTCTCATCGGATCAACCTGCCGGCAGGAGGGCACTGGGCGGTTCGCGTGCGGCGGATCACGCCTGAGGCGAACAGCTCTCTGGTCCAGGACACCATGATGCTGACTGCGATAGCTGAAGTTGTCGACAGCAACCAGGAGTTTCCGCTCACCGCCGTTGGCTGCGTGGAGTATGACGCCCAGCAGTTCGGGGGCGACTTTCCGAAGTTCTCTGCGCTCATGCGCGGGCGGATCGTGCGGGTTCCGATGAACTATGACCCTGAGACTCGGACCTATTTTACCGGCGGCCCCGGTACCACGAATGGCGTTTGGGACGGCACCTTCAAGGAGGCTTATTCCAACAATCCGGCCTGGGTCTTCTATGACCTGGTGTTGAACCCCTATTACGGTCTGGGTGAGCGCATCGACCAGAGCATGGTCAACCGTTGGGCCCTCTATCGCATTGCGCAGTACTGCGACCAGTTGGTGCCAGACGGGAAAGGCGGTCAAGAGCCTCGGTTCACTTGCAACCTCTATCTTCAGAAGCAAGAGGAGGCGTATGCCGTTCTTCAGGACCTCGCCGCAATCTTTCATGGGTTGGCGTTCTGGGATGGTAGCCAGATCACTGTCAACGCCGACATGCCTCAGGACCCGGTTTACACCTACTCCACTTCGCAGATTCTGAACGATGGCGTGGTTGCGTATTCGGGGACGCGGACGCGAGACCGCCATTCGCTGGCGATGGTCTCTTGGGACAACCCGGCCAATGCGTTCGAGACAGACAAAGAGCCGGTCTTCGACGAGGATGCGATTATCGAGCTTGGCGGGATCGTCAGGGAGGTATCGGTCGGGGCTCTCGGCTGCACCAGCCAGGGTCAGGCGCAGCGGGCGGGGCAGTGGGCGCTTATGACTGAGCAGTTGCAGACTCGTGGGGCCGTCTGGAAGGTTGGCCTGGATGGATTCATCCCGCGGCCTGGACAGGTGGTGGCTCTGGCAGACCCCATGCTTGCCGGTCGTGCGAATGGCGGCAGGATCTCGGCGGTATCTGGACGAGCAATCACCGTAGACCGAGATGTGGATATCCCGGTCGGCGCGCGGCTGCGAGTCAACCTGCCCAGTGGGCGCTCGGAAGCCAGGGCGATTCAAGGTCATGACGGACGCGTCATAACGGTGGTGGCCGACTTCAGTGAAGAGCCTTCCCCCGAGAGCGGTTGGGCGATCGACTACGACGACCTGGCCCTGATGCAGTTCTACGTCAAGAACGTGACCAGACCAAGTTGGGAGCAATTCCAGCTTGAGGTTATCCAGCACGAGCCCGGCAAGTTTGATGCGATCGATCACGGGGCGATCATCGATTCTCGGCCGATCAGCGTCCTCCCGTCCGGGGTGCAGGATCCACCTGCACGCGTATTGATCTCGCAGCACATCGCGGTCGAGCAAGGCCTGGCGGTCACGATCATGACCATCGCCTGGGACGCGGCACCGGACGCGGTAGCGTACGACGTAGAGTGGCGCTGGGGCTCGCGCGAGTGGGTCAGGGTTCCGCGTACGGGGGAGCTGATGGTGGAAGTACGTGGGGTATACACCGGCCAGTACCTTGCGCGCGTGCGGGCTGTGAACTCCATGAACGTGTCGTCGATCCCAGCGAACTCGGTGTTGACCAACATCACCGGCAAGACCGGTGCGCCGCCGGCGCTGGCGTTCCTGCGTACCACCAGCGGACCGTGGAAGATCGGCCTGGAGTGGGGATTCCCGGCCAGTGGCGCGGCGGACACCGCCTACACCGAGATCCAACAGTCGGTTACCCCAGGCGGCAGCGAACAGAACGCAACTGCCCTGGGCTTGTTTGCCTACCCGACCGACACCCACACGCTGACCTCGCTCGCGGCCGGCGCTCGCTTGGCCTTCCGCGGGCGGCTGATCGACAGGACCGGCAACGTCGGCCCCTGGTCGGCCTGGGTCGACGGTATCAGCTCGACAGATGCGAGCGAGTACAACGAACTGATCACCAAGGAGTACGTCGAGTCCGCCCTCGGCGAGCAGTTCTTCGAAAACATCGAGCAAATCGGCGGTAACGTCGACCAGTTGATGGAGCAGTACTACGACGCCGGCACGGTATACCAGAAGGGCCAGATCGTTCGATTGAACGGCAGGTTCTATCAAGCCCTCCAGGACGTTCCCGCGGGCAATCCGCCGCCGAACCCCGTTTACTGGGCTGATGTGGGCGAGCTCGTCGAATCGGTCGATGCCCTTGCGTTACGCGTGACTGAGAATGCGGCCGCGATTGAAGAGCTCGACGGTGTTGTTCAGTCCAGTGCCTCCAGCCTGGACGTGCTGCAAGCAGCCGCGCGCCGGGAGCCGGCTACCGGAGAGAAAGCGGATGCACTGAAGGGGTGGGACACCATTGCTCGAGCAGCCACCGAGGTCATCGTGCGCGCGAATGAGATCGAGGCGCAGGCGAAGCGTGTAGAGACCGTCCAGGCGCAAACGAGCGCCAACGGGGCCGCGATTCAGACCACGCAGAGCGTTGTAGCGTCACTGGATCAGGGCGTGAAGGCGATGTACAGCGTGAAGCTCCAGGCCCATGCCAATGGGCAGCAGTACGCCACCGGGTTCCAGCTTGGGTTCGACAGCGGTACGAGCGTGACGACCATGGCGTTCCAGGCTGATCGGTTCCTCTGGTTCAACAGTTCCAGCGGGCAGACCGTGGCGCCGGTCTCGATCGTCGGAGGCCAGATGTTCATCAACAACGCGATGATTCAGGACGGTTCGATTACGAACGCGAAGATCGGCAACGTGATTCAGTCGACCGCACTCGGTGCCAACGGCGAGCCGCTGTGGAAGCTTGATAAAGCAGGGAGTTTGACGATGAACAGCGCAACGTCCGGAGGCTTCATGAGGCAGACAGCGGAGGCCGTTAAAGTCTACGACGCGAACCTGGTGTTACGGGTACAGATCGGGAATCTCGACGCATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
ac54c2dba275bbaf8de6b9b78c03efda0e928a1dd9623c64b8dd64190e778931
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7808
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50