Protein

View in Explore
Genbank accession
QHR72564.1 [GenBank]
Protein name
short tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MSTNTLKHISDKSEFKTFDPTGSNFDPSITNVQDALSSISAIGVTGNIPAASETEQGIIRLATQQEVIDGTDTFSAVTPATLKGRLDIPTQATETYVGITRYATNDEAIAGTETQAAIVASSLKATIDYTFTNRLATENTTGVLKISTLPAALAGTDDTTAMTPLKTAQAIGAATSALPTYASATQTTEGIVRIATNAEVANGTLTNGVAISPSGLISLTSNTSRRGLVQLATGAEVSAGIDANKAITPQTLLSRTGNTGRIGLLKTTTTVGSGDGSTALAYNANVISTTGGTINGTLNVNGTLRRNGRDVVTVDQLKDSVPIGTIVMWGGQINNIPAGWAVCDGGNSGEQGFRNVVGSKWGSTGARPDFRGLYPRGANQTNDGGLKEWDANVRIRDAKGNDAKGKPKLGVGCGSYGHGTVQAQQLRFHKHAGGFGEHDNAGAFGNTVRSNFAGTRKGLDWDNRSYFTNEGYEIDGSGSRDSRTTLNSEGLIGNENRPWTMSILFIIKVA
Physico‐chemical
properties
protein length:510 AA
molecular weight: 53074,14910 Da
isoelectric point:6,55322
aromaticity:0,05490
hydropathy:-0,29000

Domains

Domains [InterPro]
DC_0176
STR
1–435
DC_0176
SSF69349
STR
248–333
SSF69349 IPR044916
G3DSA:2.10.280.10
Unmapped
248–285
G3DSA:2.10.280.10 IPR037053 IPR027448
IPR015173
STR
250–308
IPR015173 SSF88874
QHR72564.1
1 510
Architecture
STR
ATT
STR
STR 1-309 | ATT 310-371 | STR 372-509 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage dhabil
[NCBI] 		2696390 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli K-12
[NCBI] 		83333 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QHR72564.1 [NCBI]
Genbank nucleotide accession
MN850621.1 [NCBI]
CDS location
range 124877 -> 126409
strand +
CDS
ATGTCTACAAATACACTAAAACATATAAGTGATAAATCGGAATTTAAAACATTCGACCCTACCGGGTCGAATTTTGACCCTAGTATTACCAACGTCCAAGACGCCTTATCATCCATTTCTGCTATAGGTGTTACAGGTAATATTCCGGCCGCATCCGAAACAGAACAGGGTATTATTAGATTAGCCACCCAACAAGAAGTTATTGATGGCACTGATACTTTCTCTGCTGTGACCCCGGCTACTTTAAAAGGCCGCTTGGACATTCCTACTCAAGCAACTGAAACCTATGTAGGTATCACACGTTATGCTACTAATGATGAGGCCATCGCTGGGACAGAGACCCAGGCTGCAATCGTAGCATCATCTTTGAAGGCTACTATAGATTATACATTCACCAATCGTTTAGCCACAGAGAACACTACAGGTGTACTCAAGATTTCAACCTTGCCAGCGGCTTTAGCGGGTACAGATGATACTACGGCTATGACGCCTCTTAAAACCGCACAGGCAATTGGAGCCGCTACATCGGCCTTACCAACTTATGCAAGTGCAACACAAACTACTGAAGGTATTGTTAGAATCGCGACAAATGCCGAAGTGGCAAATGGCACATTGACTAATGGCGTCGCAATTTCTCCATCAGGGCTTATTTCTTTAACTTCTAATACTTCTCGACGTGGACTGGTTCAATTAGCCACTGGAGCTGAAGTTTCGGCCGGAATTGATGCAAATAAAGCTATTACGCCTCAAACCCTTTTGTCAAGAACGGGTAATACCGGTAGAATAGGCCTTCTTAAAACCACAACTACCGTGGGTTCTGGCGATGGAAGTACAGCATTGGCATATAATGCTAACGTTATTTCTACCACCGGTGGTACTATTAATGGTACTTTAAACGTTAATGGTACTTTACGTCGTAATGGGCGTGATGTTGTTACTGTCGACCAATTAAAAGATTCTGTTCCTATTGGTACTATCGTTATGTGGGGAGGCCAAATTAACAATATCCCTGCAGGTTGGGCCGTTTGTGATGGTGGTAACTCTGGTGAGCAAGGATTCCGAAACGTAGTTGGTAGTAAATGGGGCTCAACTGGTGCTCGTCCTGACTTCCGTGGATTATATCCTAGAGGTGCAAACCAAACTAATGACGGTGGATTAAAAGAATGGGACGCCAACGTTAGAATTAGAGACGCCAAAGGTAACGACGCCAAAGGCAAACCAAAATTAGGTGTAGGTTGTGGTTCATATGGACACGGTACAGTACAAGCTCAACAACTTCGGTTCCATAAACATGCAGGTGGTTTTGGTGAACATGATAACGCAGGTGCTTTTGGTAACACTGTTCGTTCCAACTTTGCCGGTACTCGTAAAGGATTAGACTGGGATAACCGTTCTTACTTTACAAACGAAGGATACGAAATTGACGGTTCCGGTTCACGAGATTCAAGAACTACCCTAAACAGTGAAGGGTTAATTGGTAACGAAAACCGTCCTTGGACTATGTCCATCCTATTCATTATTAAAGTTGCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
2bc4f96294b96eba2a3f72fefc299c5f17f1faacb9b1c3d86d1ec991d17104bb
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6626
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Exploring the Remarkable Diversity of Culturable Escherichia coli Phages in the Danish Wastewater Environment Olsen,N.S., Forero-Junco,L., Kot,W. and Hansen,L.H. 2020 — GenBank