Protein

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Genbank accession
YP_009102829.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MALISQSIKNLKGGISQQPDILRFAEQGSVQINGWSSESEGLQKRPPMIHLKTLGPAGYVGAQPYVHLINRDEFEQYFVVFTGEDIKVFDLDGKEYIVRGDRSYVRTANPREDLRMVTVADYTFVTNRKVVVQSNDQSVNLPGFKDQGDALINVRGGQYGRRLSIEFNGAERAAVQLPDGSQPAHVNEVDGQAIAEKLAAQLRNNLGNPSNAQDPNKWRFNVGPGFIHILAPNNDNVWGLQTKDGYADQLINPVTHYTQSFQKLPINAPDGYIVKIVGDTSKTADQYYVRFDLNRKVWVETIGWNTRTHLHYHTMPWALVRASDGNFDFKYLEWGARTVGDDTTNPYPSFTGQTINDIFFFRNRLGFLSGENIILSRTSKYFNFFPASVSNYSDDDPIDVAVSHNRVSTLKYAVPFSEELLLWSDQAQFILTASGILSSRSVELNLTTQFDVQDRARPHGVGRNVYFASPRASFTSINRYYAVQDVSSVKNAEDMTAHVPNYIPNGVFSISGTTAENFAAILTSGAPNRVYIYKFLYIDEESRQKSWSHWDFGDNVTVFAAQVINSTMTVLMSNEHAVWMGRLHFTKDSIDLPGEPYRLYIDAKRKYTIPAGTYNDDTYQTSISLAAIYGMNFTKGRVSVVFPDGKIIEVDQPINGWSSDPVLRLDGNQEGQVVYIGFNIPFTYTFSKLLIKKTAEDGSTATEDIGRLQLRRAWVNYEDSGAFTIRVNNLSREFIYTMAGARLGSDNLRVGRSNIGTGQYRFPVVGNAQTNIVTIESDASTPLNIIGCGWEGNYLRRSSGI
Physico‐chemical
properties
protein length:801 AA
molecular weight: 89770,33870 Da
isoelectric point:6,10749
aromaticity:0,11486
hydropathy:-0,35943

Domains

Domains [InterPro]
IPR058003
TTP
1–801
IPR058003
YP_009102829.1
1 801
Architecture
TTP
TTP 1-801
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009102829.1
1 801
Domain Start End Length (AA) Confidence
N-terminal 1 142 142 0,9911
Central domain 143 341 200 0,0892
C-terminal 342 801 459 0,1757
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-142
Central
143-341
C-terminal
342-801

Taxonomy

  Name Taxonomy ID Lineage
Phage Yersinia phage vB_YenP_AP5
[NCBI] 		1536611 Uroviricota > Caudoviricetes > Autographivirales > Studiervirinae > Teetrevirus
Host Yersinia enterocolitica
[NCBI] 		630 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009102829.1 [NCBI]
Genbank nucleotide accession
NC_025451 [NCBI]
CDS location
range 22876 -> 25281
strand +
CDS
ATGGCTCTCATTAGCCAATCAATCAAAAACCTCAAGGGTGGTATCAGCCAACAGCCAGATATTCTCCGGTTCGCTGAGCAAGGTAGCGTACAGATTAACGGTTGGTCTTCTGAGTCCGAGGGTCTCCAGAAGCGCCCACCGATGATTCACCTTAAGACCCTTGGCCCTGCTGGGTATGTGGGTGCGCAACCTTACGTGCATCTTATCAACCGTGATGAGTTCGAGCAGTATTTCGTCGTGTTCACTGGCGAAGACATTAAGGTGTTCGACCTCGATGGTAAGGAGTATATAGTACGTGGAGACCGCTCTTATGTGCGCACAGCTAACCCACGGGAAGACCTTCGGATGGTAACGGTGGCAGATTATACCTTTGTGACTAACCGCAAGGTGGTCGTGCAGAGTAACGACCAATCGGTCAACCTTCCGGGCTTTAAAGACCAAGGTGATGCACTGATTAATGTTCGTGGTGGGCAATATGGGCGTAGACTCTCAATCGAGTTCAACGGTGCTGAGCGTGCTGCTGTTCAACTACCAGACGGCTCACAACCAGCACACGTCAATGAGGTTGACGGTCAGGCCATCGCTGAGAAGCTGGCGGCTCAGTTGCGAAATAACCTAGGGAACCCGAGCAACGCACAAGACCCGAATAAGTGGCGCTTCAACGTTGGCCCCGGATTCATCCATATCCTTGCGCCAAATAACGATAACGTTTGGGGACTACAGACTAAGGATGGTTACGCAGACCAGCTAATCAACCCTGTAACCCATTACACTCAGTCGTTCCAGAAGCTGCCTATTAACGCTCCAGATGGGTACATTGTGAAGATTGTAGGTGACACCTCCAAGACTGCCGACCAGTATTACGTTAGGTTCGACCTCAATCGTAAGGTATGGGTAGAAACAATCGGCTGGAACACAAGGACTCACCTACACTACCACACGATGCCTTGGGCGCTGGTACGTGCTTCTGACGGGAACTTTGACTTCAAGTACCTTGAGTGGGGTGCTCGTACTGTGGGTGATGATACAACTAACCCATACCCATCGTTTACCGGACAGACAATCAACGATATTTTCTTCTTCCGTAACCGTTTAGGCTTCCTTAGTGGGGAGAACATCATCTTGTCTCGCACCTCGAAATACTTCAACTTCTTCCCGGCCTCCGTGTCAAACTACTCCGACGATGACCCAATCGACGTTGCGGTTAGCCACAACCGGGTGTCAACCTTGAAGTATGCCGTTCCGTTCTCCGAAGAGTTGCTCCTATGGTCTGACCAAGCGCAGTTCATTCTGACAGCCTCTGGTATACTTTCGAGTCGCTCCGTAGAGTTGAACCTTACGACTCAGTTTGATGTACAAGACAGGGCGCGACCACATGGTGTGGGACGTAATGTATACTTTGCGTCACCTCGCGCTTCCTTCACATCCATTAACCGATACTATGCGGTACAGGATGTAAGCTCTGTGAAGAACGCAGAGGACATGACGGCTCACGTTCCGAACTACATACCGAATGGCGTATTCAGTATATCGGGTACAACCGCTGAGAACTTCGCGGCTATCCTTACTAGCGGAGCACCTAACCGAGTGTATATCTACAAGTTCCTCTATATTGATGAGGAAAGCAGGCAGAAGTCGTGGTCTCATTGGGACTTTGGGGACAACGTTACAGTGTTTGCAGCACAGGTCATAAACTCAACAATGACAGTATTGATGAGCAATGAACATGCTGTGTGGATGGGGCGCTTACACTTCACGAAGGACTCCATAGACCTTCCGGGAGAGCCTTACAGATTATACATCGACGCTAAGAGGAAATACACCATCCCTGCCGGGACGTATAATGATGATACCTACCAGACGTCCATAAGCCTCGCAGCGATTTATGGGATGAACTTCACTAAGGGTAGAGTGTCTGTGGTCTTCCCTGATGGAAAGATTATAGAGGTAGACCAGCCAATCAACGGTTGGAGCAGTGACCCGGTGTTACGACTTGATGGGAACCAAGAGGGCCAAGTGGTTTACATTGGGTTCAACATCCCATTCACGTATACGTTCTCGAAGTTACTCATTAAGAAGACTGCTGAGGACGGCTCGACGGCTACCGAGGATATTGGTCGCTTACAGCTTCGGCGTGCGTGGGTAAACTATGAGGACTCTGGAGCGTTCACCATCCGCGTGAACAACCTGTCCCGTGAGTTCATCTACACAATGGCTGGTGCTCGCTTGGGTTCTGACAATCTGCGTGTTGGCAGGTCAAACATTGGCACAGGGCAGTACCGCTTCCCGGTTGTTGGAAACGCTCAGACGAACATAGTAACTATCGAGTCAGACGCATCAACCCCACTGAACATCATTGGGTGCGGCTGGGAGGGTAACTACCTTCGTCGTTCTTCTGGCATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
dc3d1b8c988fe40614d02e9c5d148d502b71566ff071bc1a4acbcb3860ab6149
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8879
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50