Protein

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Genbank accession
VFR12038.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,83
Protein sequence
MKTYPYDPIPPAAHPSKMMTFNPKNTSGMNSAMCNYSYSSFRPVDTGNGLNRARFFTGVVDAGSTINDTMPTKNRYYATFLDYAINYSGVGGLFSSDTEVRLTYANLNRPDYIDLTKLITDPSTPIYQLKYTLQSTGESWTEDLSTRLINIDSKTINFELTLTATTKTNPSVRFSHARTADGISFVGTAQVVIGLNGVTGSGHDWTALITTPGGVSTYAGIAVNYGRAHHSATFMHRISVLVARTAGRTWTPLTATADSVLETVIGC
Physico‐chemical
properties
protein length:267 AA
molecular weight: 29018,26560 Da
isoelectric point:8,45401
aromaticity:0,10112
hydropathy:-0,19251

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
VFR12038.1
1 267
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0064
Central domain 11 207 198 0,1783
C-terminal 208 267 59 0,9948
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-207
C-terminal
208-267

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage SPFM9
[NCBI] 		2528679 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
VFR12038.1 [NCBI]
Genbank nucleotide accession
LR535907 [NCBI]
CDS location
range 86820 -> 87623
strand -
CDS
ATGAAAACGTATCCTTACGATCCAATTCCACCGGCGGCGCACCCATCCAAGATGATGACGTTCAATCCGAAAAACACGTCAGGGATGAACAGCGCGATGTGCAACTATTCATACAGTTCGTTCCGCCCAGTGGATACAGGTAACGGCTTAAACCGCGCAAGATTCTTTACTGGCGTGGTGGATGCAGGTTCAACGATTAATGACACGATGCCGACAAAGAATCGTTATTACGCCACGTTCCTTGACTATGCGATTAACTATTCCGGCGTGGGTGGTTTGTTTAGTTCCGACACAGAAGTGCGTTTGACTTACGCTAACCTGAACCGTCCTGACTATATCGACTTGACGAAACTGATTACCGATCCGAGTACGCCGATTTATCAGCTGAAATACACCTTGCAGTCGACCGGCGAGTCGTGGACTGAGGATTTGTCTACCCGTCTGATTAACATCGATTCTAAAACGATCAACTTTGAGCTGACGCTAACCGCGACAACAAAGACTAATCCATCGGTGCGTTTCAGCCACGCGCGAACAGCGGACGGTATTTCGTTCGTGGGAACTGCACAGGTTGTTATTGGCTTGAACGGCGTTACTGGTTCCGGCCATGACTGGACGGCACTTATTACCACTCCAGGCGGCGTGAGCACGTATGCGGGAATCGCGGTTAACTACGGACGTGCCCATCACTCGGCCACGTTCATGCACCGTATTTCTGTACTCGTCGCACGCACCGCAGGGCGAACGTGGACACCTTTAACCGCAACAGCGGACAGTGTGCTAGAAACGGTAATTGGGTGTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
f908e7401ee641b90963de442fd47f38e6a43e75094b976df73ac207c15485ea
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,2644
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50