Protein

View in Explore
Genbank accession
WNO23740.1 [GenBank]
Protein name
long tail fiber protein distal subunit
RBP type
TSP
Evidence RBPdetect
Probability 0,80
Protein sequence
MANILYKNADKTVNTIAERNSISPKLDDMEVIVLDAIADIEAGPGAAVYKWSESINAWIMLANSKDEPLTSLSFSNDTLTYVDENGTSTDIDLSTRYYSKTEVDSNFVNSSGDSMTGPLSAPGITSTQNLVSDGGIRSGTFHPVVGGGNYRHAVSSITGAINVTLPVGYTATMMRFFVDVFDYSTNKSFSVMVSGYTYSVASEWRVPTAIIIGDNSVQYPVRFGYDGSKCVVSIGDETENWSYPQVTVRDFMHGYDLNTDRWDDGWTVGIGTLPSKIDAILTPSLHAKTAESADAATTATTLLNARTISLTGDASGSVSFDGSGDVSIDVTVANDSHTHDTQYYTQTQVDVIENTIYGNVGVDTTTPYKATGRTFAGVDSTVDFDTLIQGGTYERLIGNANPNKPAGSTGYNYLQVFSYGSSGNATQIAIPYGLSGNNNGRLAYRSRFSSVWNDWDYIYSTANKPTPAELGVLPEDQGAIGIENPAFNTSATDWDTFIPETMSLTTTNVNSPTGSGAHGFFIPHQGSYGTIYGTQFVARDNNFYLRSRENDIWNAWEKILTDTYSPEIADVNGLQSALDDKLDSVAGVKGDMYVHNGTSFVKLNAGLDGQILYSDSTSATGLKWDYPTIG
Physico‐chemical
properties
protein length:630 AA
molecular weight: 67935,67860 Da
isoelectric point:4,38737
aromaticity:0,10476
hydropathy:-0,28286

Domains

Domains [InterPro]
DC_1616
RBD
56–248
DC_1616 cd19958
DC_1028
STR
245–589
DC_1028
WNO23740.1
1 630
Architecture
RBD
STR
RBD 56-244 | STR 245-589 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WNO23740.1
1 630
Domain Start End Length (AA) Confidence
N-terminal 1 224 224 0,5843
Central domain 225 423 200 0,2524
C-terminal 424 630 206 0,6033
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-224
Central
225-423
C-terminal
424-630

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage pv27
[NCBI] 		3074848 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio parahaemolyticus
[NCBI] 		670 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WNO23740.1 [NCBI]
Genbank nucleotide accession
OR413349 [NCBI]
CDS location
range 147787 -> 149679
strand -
CDS
ATGGCTAATATTTTATACAAAAATGCCGATAAAACTGTCAACACGATAGCTGAGAGGAATTCAATATCTCCAAAATTGGATGATATGGAAGTGATTGTACTCGATGCTATCGCTGACATTGAGGCGGGTCCGGGTGCTGCAGTATATAAGTGGAGTGAATCCATTAATGCTTGGATAATGTTGGCTAACTCGAAGGATGAACCATTGACATCGCTATCATTTTCGAATGATACGTTGACATACGTTGATGAAAATGGCACGTCTACAGATATCGATCTTTCTACTAGATATTATTCAAAAACTGAAGTTGATTCAAACTTTGTGAATTCGAGTGGAGACTCGATGACAGGTCCATTGTCTGCACCTGGGATCACATCTACTCAGAATTTGGTATCGGATGGAGGTATTCGTTCAGGCACATTTCACCCTGTAGTTGGTGGTGGTAATTATAGACATGCAGTTTCATCAATAACGGGTGCTATTAACGTAACACTTCCGGTTGGTTATACAGCAACCATGATGCGATTTTTTGTTGATGTGTTTGATTATTCAACCAATAAATCATTCTCTGTCATGGTTTCTGGTTATACTTATTCAGTTGCGTCAGAGTGGAGAGTTCCGACTGCAATAATAATCGGAGATAACAGCGTCCAATATCCTGTTAGGTTTGGTTATGATGGTTCAAAATGTGTTGTTAGTATAGGTGATGAAACTGAAAACTGGTCTTATCCTCAGGTGACAGTTCGTGACTTTATGCACGGGTACGATCTAAACACCGACCGTTGGGACGATGGTTGGACTGTTGGAATTGGTACGCTTCCATCTAAGATTGATGCTATATTGACTCCATCTCTTCACGCTAAAACTGCTGAATCAGCTGATGCCGCAACAACAGCCACAACACTATTGAATGCAAGGACTATTTCATTAACGGGGGATGCATCTGGTTCAGTTTCATTCGATGGTTCTGGGGACGTTTCTATTGATGTAACGGTAGCTAATGATTCACATACGCACGATACTCAGTACTATACACAAACTCAAGTAGATGTGATTGAAAATACCATTTACGGGAATGTTGGTGTTGATACGACAACCCCTTATAAGGCCACTGGTCGAACCTTTGCTGGTGTTGATTCAACGGTTGACTTTGATACACTAATTCAAGGTGGTACGTATGAAAGGTTGATAGGTAATGCTAACCCAAACAAACCAGCTGGTTCAACTGGTTATAATTATCTTCAAGTATTTTCATACGGTAGTTCGGGAAATGCAACCCAAATTGCTATTCCATATGGCCTTTCAGGTAACAACAATGGTCGCTTAGCATATCGTTCTCGATTTTCATCTGTTTGGAATGATTGGGATTATATCTATTCAACTGCTAATAAACCAACACCAGCTGAGCTGGGTGTTTTACCAGAAGACCAAGGAGCAATTGGTATTGAAAACCCAGCATTTAACACAAGCGCTACTGATTGGGATACTTTCATACCAGAGACGATGTCATTAACGACTACTAACGTTAATTCTCCGACTGGTTCTGGTGCTCATGGTTTCTTTATACCACACCAAGGTAGTTACGGCACAATTTATGGTACTCAATTCGTGGCAAGGGATAATAATTTTTACCTGCGCAGTAGAGAAAATGATATTTGGAATGCATGGGAAAAGATATTAACGGATACATATTCACCAGAAATTGCTGATGTAAACGGTCTTCAGAGTGCTTTGGATGATAAACTTGATTCGGTGGCTGGTGTTAAAGGAGATATGTATGTTCACAACGGAACTAGTTTCGTTAAGTTGAATGCTGGTTTAGATGGGCAGATACTTTACTCTGATAGTACCTCAGCTACAGGTTTAAAGTGGGATTACCCAACTATTGGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
75c44c3d255e1136f2b7f73a0a7cd243235eec34f58a6a8485baeb6a93ebe021
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7169
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50