Protein

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Genbank accession
ASZ71758.1 [GenBank]
Protein name
putative receptor binding protein
RBP type
TSP
Evidence RBPdetect
Probability 0,53
Protein sequence
MTIKNFTFFSPNSTEFPVGSNNDAKLYMMLSGMDYTTFRRTDWSSPVNTALNVQYINTSFIVAGRYFELINEAVALKADSLNYIHINIDLTKTAEPVSLSCETADNSNTIDLNNASGVYKRVVDIITTNGLGVTSRVTPTQKTTVGDLTSNSLRTGDLEFTGNLKTPAKRILASGASLLLDGDVVNVSKNISDCANGWILHFTEFKSRMNGNTKNSLNQWFFIPKESVQLADVGHSFALATSTGGVVTKFAYLQGNQITGHGVNNNTSSKQFALQHVLEY
Physico‐chemical
properties
protein length:280 AA
molecular weight: 30623,01880 Da
isoelectric point:6,51303
aromaticity:0,09286
hydropathy:-0,16857

Domains

Domains [InterPro]
G3DSA:2.60.520.10
STR
1–139
G3DSA:2.60.520.10
SSF141658
STR
2–139
SSF141658
IPR048780
RBD
2–136
IPR048780
SSF141658
STR
2–135
SSF141658 DC_1408
ASZ71758.1
1 280
Architecture
STR
STR 1-280
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ASZ71758.1
1 280
Domain Start End Length (AA) Confidence
N-terminal 1 152 152 0,9618
Central domain 153 269 118 0,0207
C-terminal 270 280 10 0,9968
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-152
Central
153-269
C-terminal
270-280

Taxonomy

  Name Taxonomy ID Lineage
Phage Lactococcus phage 79201
[NCBI] 		2029672 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Lactococcus lactis
[NCBI] 		1358 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ASZ71758.1 [NCBI]
Genbank nucleotide accession
MF448568 [NCBI]
CDS location
range 16265 -> 17107
strand +
CDS
ATGACAATTAAAAACTTTACATTCTTTAGTCCAAATAGTACAGAGTTTCCAGTAGGTTCAAATAATGACGCTAAGCTCTACATGATGTTATCAGGAATGGACTACACAACGTTCAGGCGTACTGACTGGAGTTCTCCTGTTAATACAGCCTTAAACGTTCAATATATTAATACTTCTTTCATTGTGGCTGGTCGTTACTTTGAATTGATTAATGAGGCCGTAGCCCTTAAGGCTGACTCGTTAAACTATATTCACATTAATATCGATTTGACGAAAACGGCAGAACCAGTTAGCTTATCTTGCGAAACAGCAGATAACAGTAATACAATTGACTTGAATAATGCTTCTGGGGTTTATAAGCGTGTTGTAGACATCATTACAACTAATGGTTTAGGAGTGACGAGCCGTGTAACACCTACTCAAAAAACAACTGTGGGAGATTTAACTTCTAACAGTCTTAGAACAGGCGATTTAGAATTTACTGGAAACTTAAAAACTCCAGCAAAAAGAATTCTTGCTTCTGGTGCTTCGTTGTTACTTGACGGAGACGTTGTCAATGTTTCTAAAAATATATCAGACTGCGCTAATGGTTGGATTCTTCACTTCACAGAGTTTAAATCACGTATGAACGGAAATACAAAAAACTCACTTAATCAGTGGTTCTTTATTCCTAAAGAATCAGTACAGTTAGCTGATGTAGGACATTCTTTCGCTCTTGCTACTTCTACCGGCGGTGTTGTAACTAAATTTGCATATTTGCAAGGTAATCAAATCACAGGTCATGGGGTAAACAATAACACATCTTCAAAACAATTCGCACTACAACACGTATTGGAATATTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
c4aeee6e9d87ab62d05c11fe19c27fa5364e3a4a1bf473dfde17570a431f55b2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7525
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Comparative genome analysis of lactococcal phages belonging to the virulent 936 group Oliveira,J. 2024 — GenBank