Protein

View in Explore
Genbank accession
AVI04478.1 [GenBank]
Protein name
minor tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MGAELAKEYIDAWISYVSPAGQVFYLAGPQAPVAGAQNGFVLQEIRGVQAPITHLTSKGARQDGDTWNDSIYESAELDFTVEASGVTTQDTRREVRSWVDAWSPKKLGKFSWFTPENGEWWMDVRQHKNVPDVLSHVRSKRQVFTWTAVNNDAFWKSFDSVSAFGITYEDETDEFDRVDHTGLGDGYIQTYTGDEDAGVCGTDGTVMRWYPGSSKGTRYVHNLFIADKPTSDNVIVSFTYSGIQRFPFPAPAVNELWARCGVVDDGEGGQAWDGSGIRMQLVGQNVSISVFKDHEMIHTWIRPLLIAPLWGEKWTLVCGSAKNGRQYRVLRGDPGFEVLSYTEPKTESYMDEDHRYTGHGMKATAGLLNTQVLPAEIHRFSFADNLQAGQSGHLALSNRGDQDGWPRYLCYGPGTFKFSNGPGAEPTITFGPLLEGQVVMLTTLPRLRSVIDLSPNQPTEQQLSAFQDLIKDLISFATNNNVPPLLQQFESWFGILPPQGNLYELLDGRFTVPIPPKPEDGPPETSFISVSISGATIDSKVVAALTPLRKWPE
Physico‐chemical
properties
protein length:553 AA
molecular weight: 61375,90970 Da
isoelectric point:4,98378
aromaticity:0,11212
hydropathy:-0,36781

Domains

Domains [InterPro]
DC_0305
ATT
1–155
DC_0305 IPR055681 DC_0307
IPR055681
STR
151–386
IPR055681
AVI04478.1
1 553
Architecture
ATT
STR
RBD
ATT 1-155 | STR 156-395 | RBD 396-553
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AVI04478.1
1 553
Domain Start End Length (AA) Confidence
N-terminal 1 343 343 0,6167
Central domain 344 542 200 0,1574
C-terminal 543 553 10 0,7187
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-343
Central
344-542
C-terminal
543-553

Taxonomy

  Name Taxonomy ID Lineage
Phage Mycobacterium phage Sotrice96
[NCBI] 		2081629 No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AVI04478.1 [NCBI]
Genbank nucleotide accession
MG872843 [NCBI]
CDS location
range 18052 -> 19713
strand +
CDS
ATGGGGGCGGAGCTGGCGAAGGAATACATCGACGCATGGATTTCCTACGTCAGCCCAGCCGGTCAGGTGTTCTACCTGGCCGGTCCCCAGGCTCCCGTCGCGGGAGCGCAGAACGGCTTTGTCCTCCAAGAAATTCGGGGCGTTCAAGCCCCCATCACCCACCTGACGAGCAAGGGTGCCCGCCAAGACGGCGATACCTGGAACGACTCCATCTACGAATCCGCCGAGCTCGACTTCACCGTTGAGGCATCCGGCGTCACCACCCAGGACACTCGGCGCGAAGTCCGCAGCTGGGTGGACGCCTGGAGCCCCAAGAAGCTGGGCAAGTTCTCCTGGTTCACCCCGGAGAACGGTGAGTGGTGGATGGATGTCCGCCAGCACAAGAACGTGCCGGATGTCCTCTCCCACGTCCGCAGCAAGCGTCAGGTCTTCACCTGGACCGCGGTCAACAATGACGCCTTCTGGAAGTCCTTCGACTCGGTCAGCGCCTTCGGCATCACCTACGAGGACGAGACCGACGAGTTCGACCGGGTCGACCACACCGGCCTGGGCGACGGGTACATCCAGACCTACACGGGCGACGAGGACGCAGGCGTCTGCGGCACCGATGGCACCGTAATGCGTTGGTACCCGGGAAGTTCCAAGGGCACCCGCTACGTGCATAACCTGTTCATCGCGGACAAGCCCACCTCCGACAACGTCATCGTCTCCTTCACCTACAGCGGCATCCAGCGCTTCCCGTTCCCCGCACCCGCGGTCAACGAGCTCTGGGCGCGCTGCGGCGTGGTCGATGACGGCGAGGGTGGGCAAGCCTGGGACGGCAGCGGCATCCGTATGCAGCTGGTCGGCCAGAACGTCTCCATCTCGGTCTTCAAGGACCACGAGATGATCCACACATGGATCAGGCCCCTGCTGATCGCCCCGCTGTGGGGTGAGAAGTGGACGCTGGTGTGCGGCTCCGCCAAGAACGGCCGCCAGTACCGCGTGCTGCGCGGTGACCCCGGCTTCGAGGTGCTGTCCTACACCGAGCCCAAGACCGAGTCCTACATGGACGAAGACCATCGCTACACCGGGCACGGCATGAAGGCCACCGCGGGCCTGCTCAACACGCAGGTGCTCCCCGCGGAAATCCACCGCTTCTCCTTCGCCGACAACCTCCAGGCCGGTCAGTCCGGGCACTTGGCGCTGTCGAACCGCGGAGACCAGGACGGGTGGCCGCGCTACCTCTGCTACGGACCCGGCACCTTCAAGTTCAGCAACGGACCCGGCGCCGAGCCCACGATCACGTTCGGACCCCTCCTGGAGGGTCAGGTCGTCATGCTCACTACGCTGCCCCGGCTGCGCTCGGTGATCGACCTGTCGCCCAATCAGCCCACGGAGCAACAGCTCTCGGCATTCCAGGACCTCATCAAGGACCTGATCAGCTTCGCCACGAACAACAACGTCCCGCCGCTCCTGCAGCAGTTTGAAAGCTGGTTCGGCATCCTGCCCCCGCAAGGCAACCTGTACGAGCTCCTGGATGGGAGGTTCACCGTGCCAATCCCGCCGAAGCCGGAAGACGGCCCGCCTGAGACCTCGTTCATCTCGGTGTCCATCTCAGGCGCGACCATCGACAGCAAGGTGGTCGCCGCCCTAACTCCGCTGCGAAAGTGGCCCGAGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
65e6f129937c4556f2f752dada5d1b18d61a678603fbc86c31042153bdee16ff
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8402
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50