Protein

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Genbank accession
QEQ95116.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAYQTGTATNYKDVLAKLRTFATANGWTAKTWSNPASGEHELVLFSNGDTGNESIHVGYKTHTVDTSDVFNIKVWSAVSYVAGTDFDNVAGKSPNRCIGAWNAAMVYHFVVTKQSIMVVLRVSTAFHYAYLGHIRPYTSRGHWPSPLCSAASCSDHNLRWSDTTNKSGSIQRPNTGNYVVVRNDAGDWVNVTTMFPITSGGPIYDSGGYPSGNKVMQKYIWFDLECYGEPEGIYYVQGSNIQAGQLLNEGSTNYLVCPEVFRTGLTDYFAVRLV
Physico‐chemical
properties
protein length:274 AA
molecular weight: 30211,39300 Da
isoelectric point:6,69463
aromaticity:0,12774
hydropathy:-0,24927

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QEQ95116.1
1 274
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,1003
Central domain 11 209 200 0,0014
C-terminal 210 274 64 0,9990
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-209
C-terminal
210-274

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage vB_VpS_BA3
[NCBI] 		2608283 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QEQ95116.1 [NCBI]
Genbank nucleotide accession
MN175679 [NCBI]
CDS location
range 30386 -> 31210
strand -
CDS
ATGGCATATCAAACGGGTACAGCAACGAACTATAAAGATGTTCTTGCAAAGCTGCGCACGTTTGCCACTGCAAACGGTTGGACTGCAAAAACGTGGTCCAACCCTGCAAGCGGTGAGCACGAATTGGTGTTGTTCTCCAATGGGGACACAGGAAACGAAAGTATTCACGTTGGGTACAAGACCCATACGGTTGATACGAGCGATGTATTTAACATTAAGGTGTGGAGTGCGGTAAGTTACGTCGCTGGTACGGACTTTGACAACGTTGCGGGTAAGTCGCCAAACCGTTGTATTGGTGCGTGGAACGCAGCAATGGTGTATCACTTTGTGGTCACAAAGCAGAGTATTATGGTGGTGTTGCGCGTAAGTACAGCGTTCCATTATGCGTACTTGGGGCACATCCGCCCTTATACGTCGCGCGGTCACTGGCCTTCGCCTTTGTGCAGTGCTGCATCTTGTTCCGACCATAACTTGCGTTGGTCTGACACAACGAACAAAAGCGGTTCCATTCAGAGGCCAAACACTGGTAACTATGTTGTGGTTCGCAACGATGCGGGTGATTGGGTAAACGTGACCACAATGTTCCCTATTACTAGCGGTGGTCCGATTTACGATTCTGGTGGCTACCCTAGTGGTAACAAGGTTATGCAGAAGTATATCTGGTTTGACTTGGAGTGCTATGGGGAACCTGAAGGTATTTATTACGTTCAGGGTAGTAACATCCAGGCGGGGCAACTCCTTAACGAGGGTTCAACTAACTACTTGGTGTGTCCGGAAGTGTTTCGAACTGGTCTAACTGACTACTTTGCTGTGAGGCTTGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4cfdfe105746a2026f79d4f8016287a6359038edd1c76b6925a7a833969b8c1a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7892
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Identification and Characterization of Novel Phages vB_VpS_BA3 and vB_VpS_CA8 Lysing Vibrio parahaemolyticus Yang,M. and Liang,Y. 2020-02-21 — GenBank