Protein

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Genbank accession
YP_009875995.1 [GenBank]
Protein name
tail protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MNEMFSQGGKGSTGILTNKQAIARHFGVKQSEVVYFSVGVDLGGYKVIYDKETQRAYSLPVGIASGTTAVSLSTAAVLVHSAGSVDLGALAVSREEYVTLPGSFDSGSTINVKNELLTYTDGKYRWDGILPKSVAAGSTPATAGGEGSGAWMSVGDAILRSNLNEIYGASFIKGIENQFFKKTPLTIQAGGRTSGFWEVVYDEVTGMWYQWTGSYPHNFAASPTTPQQSYQGWICRGTLNQFPVNDPRNFGAHSNIEFGYQDFDSTDAIQLMIDSARFLQDNAGDNWNLQFARRGYFNFGGFCYNVSRPILVQDDHVTGLRASGMRIENGDCVRCRGLLLLFRKRTLLAILAASAHSLSSALKITASRVVSTSLTSKFRICLLRGTTSLVMLLCGPTWLHIAS
Physico‐chemical
properties
protein length:403 AA
molecular weight: 43742,96110 Da
isoelectric point:8,63891
aromaticity:0,10670
hydropathy:-0,06253

Domains

Domains [InterPro]
G3DSA:3.30.2020.50
ATT
1–95
G3DSA:3.30.2020.50 G3DSA:2.10.10.80 DC_1348
DC_1953
STR
1–195
DC_1953
IPR040775
RBD
91–156
IPR040775
YP_009875995.1
1 403
Architecture
ATT
ATT 1-386 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009875995.1
1 403
Domain Start End Length (AA) Confidence
N-terminal 1 266 266 0,9961
Central domain 267 392 127 0,5285
C-terminal 393 403 10 0,9860
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-266
Central
267-392
C-terminal
393-403

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage ST-W77
[NCBI] 		1897742 Uroviricota > Caudoviricetes > Pantevenvirales > Cvivirinae > Kuttervirus
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009875995.1 [NCBI]
Genbank nucleotide accession
NC_049378.1 [NCBI]
CDS location
range 65698 -> 66909
strand -
CDS
ATGAACGAAATGTTTAGTCAAGGTGGTAAAGGTTCGACTGGAATCTTAACCAATAAACAAGCAATAGCTAGACACTTTGGAGTTAAACAATCTGAGGTTGTTTATTTCTCAGTTGGTGTAGATTTAGGTGGGTATAAAGTTATCTATGACAAGGAAACGCAAAGAGCTTATTCCTTACCTGTTGGTATTGCTTCTGGTACTACTGCCGTCAGTCTTAGTACTGCTGCTGTACTTGTACATTCAGCAGGTTCTGTAGACTTAGGTGCATTAGCTGTATCTAGGGAAGAATATGTAACTTTACCTGGTTCATTTGATTCTGGCTCTACGATTAATGTTAAAAATGAATTACTTACTTATACGGATGGTAAGTATCGCTGGGATGGGATATTACCTAAATCTGTAGCTGCTGGTTCAACTCCAGCAACGGCTGGTGGTGAAGGTTCTGGTGCTTGGATGAGTGTGGGTGATGCCATATTGCGTTCAAATCTTAATGAGATATATGGCGCCTCCTTCATCAAAGGTATTGAAAATCAATTTTTCAAAAAAACTCCATTAACAATACAGGCGGGTGGTAGAACTTCAGGTTTTTGGGAGGTAGTTTATGATGAAGTGACTGGCATGTGGTATCAGTGGACTGGTTCATATCCGCATAATTTTGCTGCATCACCTACCACGCCACAGCAGTCGTATCAGGGATGGATTTGTCGTGGAACATTGAATCAATTCCCAGTAAATGACCCGAGAAACTTTGGTGCTCACTCAAACATTGAATTTGGATATCAGGATTTTGATTCGACCGATGCTATTCAGTTGATGATTGATAGTGCACGTTTCCTTCAGGATAATGCTGGCGATAACTGGAACCTCCAATTTGCACGCCGTGGATATTTCAATTTTGGTGGATTCTGCTATAACGTTTCCAGACCTATTCTGGTGCAAGATGACCACGTAACTGGTTTGCGCGCTTCGGGTATGCGAATTGAAAATGGGGACTGCGTGCGCTGCCGGGGTTTACTCCTGCTGTTCAGAAAAAGAACGCTGCTGGCGATACTCGCAGCATCAGCGCATTCTTTATCCTCGGCGCTAAAGATTACGGCTTCCAGAGTGGTCAGTACGTCTCTTACATCAAAATTCAGGATATGTCTTTTGAGGGGAACAACTTCGCTTGTGATGCTGTTGTGTGGGCCGACGTGGTTGCACATTGCTTCATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
d555ef55b325eaafdc699af75884177c54a5ce3608e6de92ec02a31bc7601fb6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5445
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of lytic bacteriophages ST-W77 which highly virulent against several Salmonella enteritica subsp. Typhimurium Korbsrisate,S. and Supokaivanich,R. 2011-07-26 — GenBank