Protein

View in Explore
Genbank accession
YP_010094701.1 [GenBank]
Protein name
long tail fiber protein distal subunit
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,72
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MATLKSIQFKRSKIAGAKPTAAQLDEGELAINLRDRTIFTKSDQGQIIDLGFAKGGQVDGDVTINGRLTLDGELVQTSTAGMRTEGSITAPVFRARNGSFYARASNDTSNAHLWFENTNGSERAVLYAKPQSENEGVATMRVRQGTAAGAQNSEFHFISTDGGIFQARKLTALTSISTPTISVNLINHDSKAFGQYDSQSLVQYVYPGTGETNGVNYLRKVRAKSGGTMWHELCTAQLGQADELSWWTGNTPSSKQYGIRNDGRMAGRNSLALGTFTTDFPSSDYGNVGVMGDKYLVLGDTVTGLKYIKQGNFDLVGGGYSVASVTSDGFRGTSKTIFGRSNDQGLTWLLPGQNSSMVSIRTEIDGNNSGDGQTHLGYNSNGKLYHYFRGTGRVAISMAEGMIIEPGILNIKTGVNELNLRADGTVSSTQRLQINNGLVLNSNNNTSALAFTAPTAVDGTKTLNWDSGTRAGQNKNTVILKAWGNSFNAEKGNRETVWEVSDSQGYYFYAQRTNPAVAGGVGPVNFKFNGTVETGHIIGLGNISASGTGSFGGNVTMTNGLFVQGGASINGQVKMGGTADALRIWNAEYGMIFRRSETGSSASFHLIPTLQNAGENGGISDLRPLSINLANGTVIMGNKTSTGGPLFTVDNVSKFVQTDCRLRVNMDSDAIVVNASSQAASNFIQGRKADVTKWYLGIGDGGNVVRLHNYTYSHGIALNSDTVDITKALKIGSDVRIGPDGNITGSTALENFKNLNTTLDRKVNTGGWQGGAATGWYKFATVEIPQGAGTASFKISGGSGFNFKSYGQASIAEIVLRTGNNNPKGLNATLWNRTSEAISQIASVNTSDDIYDIYVYLGGYSNSLVVEYACSSNSKVTVVGINSDVQPLVETLPEGHVVGKSVRMLNNIDGMFAAGESDIVTRGEYVTNNQKGMRIKSSGNDIGSNAALIRNDGGSFYILVTDKNTAENPNATDGLWNGLRPFSINMADGRVGMNHGLNITGGGLNVTGGNTNLGNITSRVVSSARAPGGWADNSDSTKSKITFMADHGDLSNSGSYYPIVGAWSNYGSAGYRQTFEFGWVGTGTTAGWRDGIIRIRGDNATGQQARWRFTMDGLLDCPGKVQMPQTSAFGVNTTNSLGGSSITFGDSDTGIKQNGDGLLDIYANGVQTFRFQNGDLYSYKNINAPNVYIRSDIRLKSNFKPIENALEKVEQLDGLIYDKAEYIGGEAVQTEAGVIAQNLKEVLPEAVHESLDSQENTVLTVSTQAQVALLIEAVKTLSAKVRELEAKLN
Physico‐chemical
properties
protein length:1289 AA
molecular weight: 137371,95100 Da
isoelectric point:6,58402
aromaticity:0,08068
hydropathy:-0,32203

Domains

Domains [InterPro]
DC_1954
STR
1–1289
DC_1954
IPR048390
ATT
483–627
IPR048390 G3DSA:6.20.80.10 IPR030392
IPR048388
ATT
671–748
IPR048388 IPR030392 Coil
YP_010094701.1
1 1289
Architecture
STR
ATT
STR
ATT
STR
STR 1-482 | ATT 483-627 | STR 628-670 | ATT 671-748 | STR 749-1289
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010094701.1
1 1289
Domain Start End Length (AA) Confidence
N-terminal 1 932 932 0,0274
Central domain 933 1131 200 0,2936
C-terminal 1132 1289 157 0,9656
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-932
Central
933-1131
C-terminal
1132-1289

Taxonomy

  Name Taxonomy ID Lineage
Phage Enterobacteria phage vB_EcoM_IME341
[NCBI] 		2163891 Uroviricota > Caudoviricetes > Pantevenvirales > Tevenvirinae > Dhakavirus
Host Escherichia coli BL21(DE3)
[NCBI] 		469008 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010094701.1 [NCBI]
Genbank nucleotide accession
NC_055742 [NCBI]
CDS location
range 12972 -> 16841
strand -
CDS
ATGGCTACTTTAAAATCGATACAATTTAAAAGAAGTAAAATAGCAGGAGCCAAGCCTACTGCAGCCCAGTTAGATGAAGGTGAACTGGCTATTAACTTGCGTGACCGCACTATTTTTACTAAGTCAGACCAGGGACAGATTATTGATTTAGGTTTTGCAAAGGGCGGTCAGGTTGATGGTGATGTAACTATTAACGGCCGTTTGACTTTAGATGGCGAACTTGTTCAAACTAGTACCGCGGGTATGAGAACTGAAGGTAGTATTACTGCCCCAGTTTTCCGAGCTCGTAATGGTTCATTTTATGCTAGAGCATCTAATGATACTTCTAATGCTCATTTGTGGTTTGAAAATACCAACGGTTCTGAACGCGCTGTATTATATGCTAAGCCCCAATCTGAAAATGAAGGCGTAGCAACAATGCGAGTTCGTCAAGGTACTGCTGCCGGCGCACAGAACTCAGAGTTTCATTTTATTTCTACAGATGGCGGCATCTTCCAGGCACGCAAATTAACTGCTTTAACTTCTATTAGTACACCAACTATTAGTGTTAATTTAATTAATCATGATTCTAAAGCCTTTGGACAATACGATTCACAATCATTAGTTCAGTATGTTTATCCAGGCACCGGTGAAACGAATGGTGTAAACTATCTTCGTAAAGTTCGTGCTAAATCCGGCGGCACAATGTGGCACGAGCTTTGCACCGCCCAATTAGGTCAAGCTGATGAACTGTCTTGGTGGACAGGTAATACTCCGTCATCTAAACAATATGGCATTCGTAATGACGGACGAATGGCAGGCCGTAATAGCCTTGCATTAGGTACATTCACTACAGATTTCCCGTCTAGTGATTATGGTAACGTCGGTGTAATGGGCGATAAGTATCTTGTTCTAGGTGACACTGTAACTGGTCTGAAATATATTAAACAAGGTAATTTTGATTTAGTAGGTGGAGGTTATTCTGTCGCTTCTGTTACTTCCGACGGCTTCCGTGGGACTAGTAAAACCATATTTGGCCGTAGTAATGACCAAGGTCTTACTTGGCTTCTGCCTGGCCAGAACTCTTCTATGGTTTCTATTAGAACCGAAATAGACGGTAATAACTCTGGGGATGGTCAAACCCATTTAGGTTATAATTCTAATGGTAAACTTTATCATTATTTCCGTGGTACAGGTCGTGTAGCCATTTCTATGGCAGAAGGCATGATTATTGAACCAGGTATTTTGAATATTAAAACCGGGGTTAATGAACTGAATCTTAGAGCCGATGGCACAGTTTCCTCGACCCAACGTCTGCAAATTAATAATGGCCTTGTTCTTAATTCTAATAATAACACTTCAGCCTTAGCTTTCACTGCTCCTACAGCCGTTGACGGGACAAAAACCCTTAATTGGGATTCAGGTACTCGCGCAGGTCAGAACAAAAACACTGTTATACTTAAAGCATGGGGTAACTCATTTAATGCTGAAAAAGGTAATAGAGAAACTGTTTGGGAAGTTTCAGATTCACAAGGTTATTATTTTTATGCCCAACGAACCAATCCAGCTGTTGCTGGTGGTGTGGGACCTGTTAATTTTAAGTTTAACGGAACTGTTGAAACAGGCCATATCATAGGCCTTGGTAATATAAGTGCCTCTGGTACAGGTTCTTTTGGTGGCAATGTTACCATGACTAATGGCCTGTTTGTCCAAGGTGGTGCTTCAATTAACGGGCAAGTTAAAATGGGCGGTACCGCTGACGCATTAAGAATTTGGAATGCCGAATACGGTATGATTTTCCGTCGTTCAGAAACAGGTTCTTCTGCTTCATTCCATCTTATTCCTACTCTCCAGAACGCTGGTGAAAACGGTGGAATAAGCGACCTTCGCCCGCTTTCCATTAATTTGGCTAATGGCACGGTTATAATGGGTAATAAAACTTCTACAGGTGGTCCACTTTTTACAGTAGACAACGTAAGTAAATTTGTTCAGACCGACTGTAGACTGCGTGTTAATATGGATTCCGACGCCATTGTGGTAAATGCTTCATCCCAGGCGGCATCTAACTTTATCCAAGGACGTAAAGCCGATGTTACAAAATGGTATTTAGGTATTGGCGATGGTGGTAACGTTGTTCGTTTACATAACTATACATACTCCCATGGTATTGCATTAAACTCTGATACTGTTGATATAACCAAGGCACTTAAAATTGGTTCCGATGTTCGTATTGGTCCTGACGGTAATATTACAGGCAGCACTGCATTAGAAAACTTTAAAAACCTGAACACAACGTTAGACCGTAAAGTTAACACAGGCGGTTGGCAAGGCGGCGCTGCTACAGGTTGGTATAAATTTGCTACTGTAGAAATTCCACAAGGTGCGGGTACAGCATCCTTTAAAATATCAGGTGGGTCTGGATTTAATTTTAAAAGTTATGGTCAGGCTTCAATAGCCGAAATAGTCCTTAGAACCGGCAATAATAATCCTAAAGGCCTTAATGCTACGTTGTGGAATAGAACTTCTGAAGCTATTTCCCAGATTGCTTCGGTTAACACAAGCGATGATATCTATGATATTTACGTTTACTTAGGTGGGTATTCTAATTCTTTGGTAGTAGAATATGCATGCAGTAGCAATAGTAAAGTAACCGTAGTGGGTATTAATAGCGATGTCCAGCCTTTGGTAGAAACATTACCTGAAGGTCATGTTGTAGGTAAATCTGTAAGAATGCTGAACAACATTGACGGAATGTTTGCTGCTGGCGAATCGGATATTGTTACACGTGGTGAATACGTTACCAATAATCAAAAAGGTATGCGTATCAAATCCAGTGGTAATGATATAGGTTCTAATGCTGCTTTGATTAGAAACGACGGTGGAAGTTTTTATATTTTAGTTACAGATAAAAACACGGCAGAAAACCCAAATGCAACTGACGGGCTGTGGAATGGCTTAAGACCTTTCTCTATCAACATGGCCGATGGCCGTGTTGGCATGAACCACGGGTTAAATATTACTGGTGGCGGATTAAACGTTACCGGTGGTAATACTAACCTTGGCAATATTACTTCGCGAGTGGTTTCATCTGCACGCGCGCCGGGCGGTTGGGCTGATAACTCAGATTCCACGAAATCTAAAATCACCTTTATGGCAGACCATGGTGATTTATCCAATTCGGGTAGTTATTATCCTATTGTCGGTGCGTGGAGTAACTATGGTTCAGCGGGTTATCGTCAAACCTTTGAATTTGGATGGGTCGGCACTGGTACCACAGCTGGTTGGCGCGATGGCATTATTCGTATACGTGGCGACAACGCTACCGGCCAACAAGCAAGATGGCGCTTTACAATGGACGGTCTTTTAGATTGCCCTGGTAAAGTACAGATGCCACAAACAAGTGCCTTTGGTGTTAATACAACTAACTCACTCGGTGGAAGTAGTATAACATTTGGCGATAGTGATACCGGTATTAAGCAAAATGGCGATGGATTATTAGACATATATGCGAATGGCGTACAGACTTTCCGTTTCCAAAACGGTGATTTGTATTCATATAAAAATATAAATGCTCCTAACGTTTATATTCGTTCTGATATTCGTTTAAAATCTAACTTCAAGCCTATTGAAAATGCTCTTGAAAAGGTTGAACAACTCGATGGTTTAATCTATGATAAAGCTGAATATATCGGTGGTGAAGCGGTTCAAACTGAAGCAGGTGTTATTGCTCAGAATCTTAAAGAAGTATTACCTGAAGCGGTGCATGAGTCTTTAGATTCACAGGAAAATACGGTTCTAACAGTTTCGACTCAGGCACAAGTTGCTCTGTTAATTGAAGCGGTTAAAACCCTGTCGGCTAAAGTTAGAGAACTTGAAGCTAAATTAAATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
fbd95c5f53f8a3afd8496fe1e7f5cae39c931165b76eb7bbbcf826d5d3ebfca1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5140
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence analysis of Enterobacteria phage IME341 Li,P., Wang,J. and Tong,Y. 2016-02-25 — GenBank