Protein

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Genbank accession
AUR93151.1 [GenBank]
Protein name
stabilization protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MQREIPLAANTSEQDISGNELLVNVYPRASAGGKYPFNLINTPGLAFFCELPTFPVLGLHNNKGRVFAVTPSKMYEIFKNGTFKELGDVDLKGRVSMEDNGIQVVIVDGFKGFYYDANTNEVEQITHEAFYPASTVTYQDGYFLFDRKGTGQFFISELLNVDFDPLDFATAEGQPDNLVAILSDHREIFLFGSETIEVWYNSGASDFPFERNQGAFIEKGCGARYSVAKQNNTVYFVGSDLMVYQMTGYTPVRISTHAVEKTLKDVDLSDAFAYTYQDEGHLFYVLTIPSRDITWCYDISTGAWHVRQSYQFGRHQSNNAIFFDSKTLVGDFQNGRIYQMAGNYYTDDGEPVVREFVLPTVNNGREFLTIDSLEFDMGTGVGLISGQGNDPELRVYFSKDSGKTYSESFKRGRIGKVGEYLTRAKVNRFGAARQFTFKVEISDPIPIDIGGAWVEVR
Physico‐chemical
properties
protein length:457 AA
molecular weight: 51389,82690 Da
isoelectric point:4,88460
aromaticity:0,14004
hydropathy:-0,29081

Domains

Domains [InterPro]
DC_1784
STR
4–457
DC_1784
IPR021098
STR
65–206
IPR021098
AUR93151.1
1 457
Architecture
STR
STR 4-457
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR93151.1
1 457
Domain Start End Length (AA) Confidence
N-terminal 1 445 445 0,8230
Central domain 446 446 2 0,0032
C-terminal 447 457 10 0,9978
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-445
Central
446-446
C-terminal
447-457

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.184.A._10N.286.49.A5
[NCBI] 		1881254 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio cyclitrophicus
[NCBI] 		47951 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR93151.1 [NCBI]
Genbank nucleotide accession
MG592550 [NCBI]
CDS location
range 9909 -> 11282
strand +
CDS
ATGCAAAGAGAGATACCGCTTGCGGCCAACACTTCAGAGCAGGACATATCAGGCAATGAGTTGCTTGTTAACGTGTATCCTCGCGCTTCAGCAGGTGGAAAGTACCCATTCAACCTAATCAACACGCCAGGACTCGCATTCTTTTGCGAGCTTCCTACGTTTCCGGTTCTTGGTCTTCACAATAATAAAGGCCGAGTATTTGCTGTTACGCCTTCAAAGATGTATGAAATATTTAAGAATGGAACCTTTAAAGAGCTAGGCGATGTGGACCTTAAAGGCCGAGTTTCTATGGAGGATAACGGCATTCAGGTTGTTATAGTTGATGGATTTAAAGGCTTCTACTATGACGCTAACACCAACGAAGTTGAGCAGATAACTCACGAAGCTTTCTATCCAGCCTCAACAGTAACTTATCAAGATGGATACTTTCTGTTTGACCGTAAAGGTACAGGGCAGTTCTTTATATCTGAGTTGCTTAATGTAGACTTCGACCCTTTAGACTTCGCCACTGCTGAAGGCCAGCCGGATAACCTTGTTGCCATACTTAGTGATCACCGTGAGATATTTCTGTTTGGCTCAGAAACAATTGAGGTCTGGTATAACTCCGGTGCTTCTGACTTTCCCTTTGAGAGAAACCAGGGCGCATTTATAGAAAAGGGTTGTGGTGCTCGTTACTCAGTAGCAAAGCAAAACAACACCGTTTACTTTGTTGGATCTGACTTAATGGTCTACCAAATGACTGGATACACGCCAGTTAGGATAAGCACTCACGCAGTAGAGAAGACACTTAAAGACGTTGATTTGAGTGATGCGTTTGCCTACACGTACCAGGATGAAGGTCACTTGTTCTACGTGCTAACTATTCCAAGTAGAGATATTACATGGTGTTACGATATTTCAACTGGGGCCTGGCATGTTCGCCAGTCTTATCAGTTCGGCCGGCACCAATCAAACAACGCGATCTTCTTTGACTCAAAAACGTTGGTTGGCGATTTTCAGAACGGTAGAATCTATCAAATGGCTGGCAACTACTACACAGATGACGGCGAACCTGTTGTTCGTGAGTTTGTTTTGCCTACCGTCAACAATGGTCGAGAGTTCTTGACCATTGATAGTTTAGAGTTTGATATGGGTACTGGTGTCGGGCTTATTAGTGGCCAGGGTAATGATCCAGAGTTGCGCGTATACTTCTCGAAAGACTCAGGAAAGACATACAGCGAAAGCTTTAAACGTGGTCGCATTGGTAAGGTTGGCGAATACCTAACAAGGGCCAAGGTTAACCGCTTTGGAGCTGCTAGGCAGTTCACCTTTAAAGTTGAAATATCAGATCCAATACCGATTGACATCGGAGGGGCGTGGGTCGAAGTCAGGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
1cd34041907875420059e7e2595e49ecb58751a9aff3c882cc606ddf736b7ea9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8914
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank